ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
tae-r.2	123138288	DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
tae-r.2	123128420	DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
tae-r.2	123145542	DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
hvu-r.1	123400978	DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
bdi-r.1	100842242	DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
osa-u.5	4330670	DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
zma-u.5	103627701	DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
sbi-r.1	8075739	DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
ath-u.5	EMB25	DEAD/DEAH box helicase
gma-u.5	100780908	DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
sly-u.5	101246924	DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
bra-r.6	103831550	DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
vvi-u.5	100253458	DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
ppo-u.5	7492412	DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
mtr-u.5	11413717	DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
ghi-r.1	107903689	DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
ghi-r.1	107886318	DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
bna-r.1	106347226	DExH-box ATP-dependent RNA helicase DExH15 chloroplastic-like
bna-r.1	106429555	DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
sot-r.1	102584107	DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic
cit-r.1	102612885	DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
nta-r.1	107802326	DExH-box ATP-dependent RNA helicase DExH15 chloroplastic-like
nta-r.1	107809361	DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
cre-r.1	CHLRE_01g027150v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0070478 [list] [network] nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay

(5 genes)

IEA

GO CC

GO:0055087 [list] [network] Ski complex

(8 genes)

IEA

GO MF

GO:0005524 [list] [network] ATP binding	(7858 genes)	IEA
GO:0003676 [list] [network] nucleic acid binding	(11810 genes)	IEA

Protein

XP_044414172.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9, nucl 1, plas 1, nucl_plas 1

(predict for XP_044414172.1)

Subcellular
localization
TargetP

chlo 6

(predict for XP_044414172.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123138288	tae-r.2 for 123128420	tae-r.2 for 123145542	hvu-r.1 for 123400978	bdi-r.1 for 100842242	osa-u.5 for 4330670	zma-u.5 for 103627701	sbi-r.1 for 8075739	ath-u.5 for EMB25	gma-u.5 for 100780908	sly-u.5 for 101246924	bra-r.6 for 103831550	vvi-u.5 for 100253458	ppo-u.5 for 7492412	mtr-u.5 for 11413717	ghi-r.1 for 107903689	ghi-r.1 for 107886318	bna-r.1 for 106347226	bna-r.1 for 106429555	sot-r.1 for 102584107	cit-r.1 for 102612885	nta-r.1 for 107802326	nta-r.1 for 107809361	cre-r.1 for CHLRE_01g027150v5

Ortholog

Ortholog ID: 11114

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

EMB25

Function^*