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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107811607   pentatricopeptide repeat-containing protein At1g74600, chloroplastic-like 
 nta-r.1   142161626   pentatricopeptide repeat-containing protein At1g74600, chloroplastic-like 
 sly-u.5   101245408   pentatricopeptide repeat-containing protein 
 sot-r.1   107057805   pentatricopeptide repeat-containing protein At1g74600, chloroplastic 
 ath-u.5   OTP87   pentatricopeptide (PPR) repeat-containing protein 
 bra-r.6   103831929   pentatricopeptide repeat-containing protein At1g74600, chloroplastic 
 vvi-u.5   100248528   pentatricopeptide repeat-containing protein At1g74600, chloroplastic 
 mtr-u.5   25498177   pentatricopeptide repeat-containing protein At1g74600, chloroplastic 
 ghi-r.1   107941782   pentatricopeptide repeat-containing protein At1g74600, chloroplastic 
 ghi-r.1   107946512   pentatricopeptide repeat-containing protein At1g74600, chloroplastic 
 bna-r.1   125589143   pentatricopeptide repeat-containing protein At1g74600, chloroplastic-like 
 bna-r.1   106404445   pentatricopeptide repeat-containing protein At1g74600, chloroplastic-like 
 osa-u.5   4347047   pentatricopeptide repeat-containing protein At1g74600, chloroplastic 
 zma-u.5   100381772   Pentatricopeptide repeat-containing protein chloroplastic 
 hvu-r.1   123398294   pentatricopeptide repeat-containing protein At1g74600, chloroplastic 
 sbi-r.1   8060243   pentatricopeptide repeat-containing protein At1g74600, chloroplastic 
 bdi-r.1   100824936   pentatricopeptide repeat-containing protein At1g74600, chloroplastic 

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Top 50 coexpressed genes to 107811607 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107811607 (nta-r.1 coexpression data)

CoexMap"107811607"


ntaLOC107811607 | Entrez gene ID : 107811607      
Species nta sly sot ath bra vvi mtr ghi bna osa zma hvu sbi bdi gma cre ppo cit tae
Paralog 2 1 1 1 1 1 1 2 2 1 1 1 1 1 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016492059.1 [sequence] [blastp]
XP_016492060.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 2,  E.R. 2,  chlo_mito 2  (predict for XP_016492059.1)
chlo 4,  nucl 2,  E.R. 2,  chlo_mito 2  (predict for XP_016492060.1)
Subcellular
localization
TargetP
chlo 4  (predict for XP_016492059.1)
chlo 4  (predict for XP_016492060.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107811607
nta-r.1
for
142161626
sly-u.5
for
101245408
sot-r.1
for
107057805
ath-u.5
for
OTP87
bra-r.6
for
103831929
vvi-u.5
for
100248528
mtr-u.5
for
25498177
ghi-r.1
for
107941782
ghi-r.1
for
107946512
bna-r.1
for
125589143
bna-r.1
for
106404445
osa-u.5
for
4347047
zma-u.5
for
100381772
hvu-r.1
for
123398294
sbi-r.1
for
8060243
bdi-r.1
for
100824936


Ortholog ID: 12049
Species nta nta sly sot ath bra vvi mtr ghi ghi bna bna osa zma hvu sbi bdi
Symbol LOC107811607 LOC142161626 LOC101245408 LOC107057805 OTP87 LOC103831929 LOC100248528 LOC25498177 LOC107941782 LOC107946512 LOC125589143 LOC106404445 LOC4347047 LOC100381772 LOC123398294 LOC8060243 LOC100824936
Function* pentatricopeptide repeat-containing protein At1g74600, chloroplastic-like pentatricopeptide repeat-containing protein At1g74600, chloroplastic-like pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At1g74600, chloroplastic pentatricopeptide (PPR) repeat-containing protein pentatricopeptide repeat-containing protein At1g74600, chloroplastic pentatricopeptide repeat-containing protein At1g74600, chloroplastic pentatricopeptide repeat-containing protein At1g74600, chloroplastic pentatricopeptide repeat-containing protein At1g74600, chloroplastic pentatricopeptide repeat-containing protein At1g74600, chloroplastic pentatricopeptide repeat-containing protein At1g74600, chloroplastic-like pentatricopeptide repeat-containing protein At1g74600, chloroplastic-like pentatricopeptide repeat-containing protein At1g74600, chloroplastic Pentatricopeptide repeat-containing protein chloroplastic pentatricopeptide repeat-containing protein At1g74600, chloroplastic pentatricopeptide repeat-containing protein At1g74600, chloroplastic pentatricopeptide repeat-containing protein At1g74600, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
mtr03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107811607 142161626 101245408 107057805 843800 103831929 100248528 25498177 107941782 107946512 125589143 106404445 4347047 100381772 123398294 8060243 100824936
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