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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25498177   pentatricopeptide repeat-containing protein At1g74600, chloroplastic 
 mtr-r.5   25498177   pentatricopeptide repeat-containing protein At1g74600, chloroplastic 
 ath-u.5   OTP87   pentatricopeptide (PPR) repeat-containing protein 
 vvi-u.5   100248528   pentatricopeptide repeat-containing protein At1g74600, chloroplastic 
 sly-u.5   101245408   pentatricopeptide repeat-containing protein 
 osa-u.5   4347047   pentatricopeptide repeat-containing protein At1g74600, chloroplastic 
 zma-u.5   100381772   Pentatricopeptide repeat-containing protein chloroplastic 

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Top 50 coexpressed genes to 25498177 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25498177 (mtr-u.5 coexpression data)

CoexMap"25498177"


mtrLOC25498177 | Entrez gene ID : 25498177      
Species mtr ath vvi sly osa zma hvu bna cit bra ghi ppo sbi bdi nta gma tae cre sot
Paralog 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (432 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1400 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5045 genes)  IEA  
Protein XP_013448510.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  cyto 1,  mito 1  (predict for XP_013448510.1)
Subcellular
localization
TargetP
chlo 4,  mito 3  (predict for XP_013448510.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25498177
mtr-r.5
for
25498177
ath-u.5
for
OTP87
vvi-u.5
for
100248528
sly-u.5
for
101245408
osa-u.5
for
4347047
zma-u.5
for
100381772


Ortholog ID: 12049
Species mtr ath bra vvi ghi ghi bna bna sly sot nta nta osa zma hvu sbi bdi
Symbol LOC25498177 OTP87 LOC103831929 LOC100248528 LOC107946512 LOC107941782 LOC106404445 LOC125589143 LOC101245408 LOC107057805 LOC107811607 LOC142161626 LOC4347047 LOC100381772 LOC123398294 LOC8060243 LOC100824936
Function* pentatricopeptide repeat-containing protein At1g74600, chloroplastic pentatricopeptide (PPR) repeat-containing protein pentatricopeptide repeat-containing protein At1g74600, chloroplastic pentatricopeptide repeat-containing protein At1g74600, chloroplastic pentatricopeptide repeat-containing protein At1g74600, chloroplastic pentatricopeptide repeat-containing protein At1g74600, chloroplastic pentatricopeptide repeat-containing protein At1g74600, chloroplastic-like pentatricopeptide repeat-containing protein At1g74600, chloroplastic-like pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At1g74600, chloroplastic pentatricopeptide repeat-containing protein At1g74600, chloroplastic-like pentatricopeptide repeat-containing protein At1g74600, chloroplastic-like pentatricopeptide repeat-containing protein At1g74600, chloroplastic Pentatricopeptide repeat-containing protein chloroplastic pentatricopeptide repeat-containing protein At1g74600, chloroplastic pentatricopeptide repeat-containing protein At1g74600, chloroplastic pentatricopeptide repeat-containing protein At1g74600, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00540 Lipopolysaccharide biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 25498177 843800 103831929 100248528 107946512 107941782 106404445 125589143 101245408 107057805 107811607 142161626 4347047 100381772 123398294 8060243 100824936
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