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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8060243   pentatricopeptide repeat-containing protein At1g74600, chloroplastic 
 zma-u.5   100381772   Pentatricopeptide repeat-containing protein chloroplastic 
 osa-u.5   4347047   pentatricopeptide repeat-containing protein At1g74600, chloroplastic 
 ath-u.5   OTP87   pentatricopeptide (PPR) repeat-containing protein 
 sly-u.5   101245408   pentatricopeptide repeat-containing protein 
 vvi-u.5   100248528   pentatricopeptide repeat-containing protein At1g74600, chloroplastic 
 mtr-u.5   25498177   pentatricopeptide repeat-containing protein At1g74600, chloroplastic 

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Top 50 coexpressed genes to 8060243 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8060243 (sbi-r.1 coexpression data)

CoexMap"8060243"


sbiLOC8060243 | Entrez gene ID : 8060243    
Species sbi zma osa ath sly vvi mtr bra nta cre hvu cit bdi ppo sot tae bna ghi gma
Paralog 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_021307885.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  chlo_mito 3,  nucl 2,  cyto 2,  cyto_nucl 2  (predict for XP_021307885.1)
Subcellular
localization
TargetP
other 3,  mito 3  (predict for XP_021307885.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8060243

.
zma-u.5
for
100381772

.
osa-u.5
for
4347047

.
ath-u.5
for
OTP87

.
sly-u.5
for
101245408

.
vvi-u.5
for
100248528

.
mtr-u.5
for
25498177

.


Ortholog ID: 12049
Species ath sly osa zma bra vvi mtr hvu ghi ghi bna bna sbi sot bdi nta nta
Symbol OTP87 LOC101245408 LOC4347047 LOC100381772 LOC103831929 LOC100248528 LOC25498177 LOC123398294 LOC107946512 LOC107941782 LOC106404445 LOC125589143 LOC8060243 LOC107057805 LOC100824936 LOC107811607 LOC142161626
Function* pentatricopeptide (PPR) repeat-containing protein pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At1g74600, chloroplastic Pentatricopeptide repeat-containing protein chloroplastic pentatricopeptide repeat-containing protein At1g74600, chloroplastic pentatricopeptide repeat-containing protein At1g74600, chloroplastic pentatricopeptide repeat-containing protein At1g74600, chloroplastic pentatricopeptide repeat-containing protein At1g74600, chloroplastic pentatricopeptide repeat-containing protein At1g74600, chloroplastic pentatricopeptide repeat-containing protein At1g74600, chloroplastic pentatricopeptide repeat-containing protein At1g74600, chloroplastic-like pentatricopeptide repeat-containing protein At1g74600, chloroplastic-like pentatricopeptide repeat-containing protein At1g74600, chloroplastic pentatricopeptide repeat-containing protein At1g74600, chloroplastic pentatricopeptide repeat-containing protein At1g74600, chloroplastic pentatricopeptide repeat-containing protein At1g74600, chloroplastic-like pentatricopeptide repeat-containing protein At1g74600, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00540 Lipopolysaccharide biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843800 101245408 4347047 100381772 103831929 100248528 25498177 123398294 107946512 107941782 106404445 125589143 8060243 107057805 100824936 107811607 142161626
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