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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1  107817039  pentatricopeptide repeat-containing protein At4g25270, chloroplastic-like 
 nta-r.1  107803788  pentatricopeptide repeat-containing protein At4g25270, chloroplastic-like 
 sly-u.5  101243676  pentatricopeptide repeat-containing protein 
 sot-r.1  107061653  pentatricopeptide repeat-containing protein At4g25270, chloroplastic 
 ath-u.5  OTP70  Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5  112997711  pentatricopeptide repeat-containing protein At4g25270, chloroplastic 
 bra-r.6  103863081  pentatricopeptide repeat-containing protein At4g25270, chloroplastic 
 vvi-u.5  100241682  pentatricopeptide repeat-containing protein At4g25270, chloroplastic 
 ppo-u.5  7476750  pentatricopeptide repeat-containing protein At4g25270, chloroplastic 
 mtr-u.5  25489190  pentatricopeptide repeat-containing protein At4g25270, chloroplastic 
 ghi-r.1  107946850  pentatricopeptide repeat-containing protein At4g25270, chloroplastic-like 
 ghi-r.1  107933481  pentatricopeptide repeat-containing protein At4g25270, chloroplastic 
 ghi-r.1  107900108  pentatricopeptide repeat-containing protein At4g25270, chloroplastic 
 cit-r.1  112499593  pentatricopeptide repeat-containing protein At4g25270, chloroplastic 
 osa-u.5  4334814  pentatricopeptide repeat-containing protein At4g25270, chloroplastic 
 hvu-r.1  123395175  pentatricopeptide repeat-containing protein At4g25270, chloroplastic-like 
 bdi-r.1  100824336  pentatricopeptide repeat-containing protein At4g25270, chloroplastic 

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Top 50 coexpressed genes to 107817039 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107817039 (nta-r.1 coexpression data)

CoexMap"107817039"


ntaLOC107817039 | Entrez gene ID : 107817039
Species nta sly sot ath gma bra vvi ppo mtr ghi cit osa hvu bdi tae bna zma cre sbi
Paralog 2 1 1 1 1 1 1 1 1 3 1 1 1 1 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_075108674.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_075108674.1)
Subcellular
localization
TargetP
chlo 5  (predict for XP_075108674.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

nta-r.1
for
107817039


nta-r.1
for
107803788


sly-u.5
for
101243676


sot-r.1
for
107061653


ath-u.5
for
OTP70


gma-u.5
for
112997711


bra-r.6
for
103863081


vvi-u.5
for
100241682


ppo-u.5
for
7476750


mtr-u.5
for
25489190


ghi-r.1
for
107946850


ghi-r.1
for
107933481


ghi-r.1
for
107900108


cit-r.1
for
112499593


osa-u.5
for
4334814


hvu-r.1
for
123395175


bdi-r.1
for
100824336



Ortholog ID: 9609
Species nta nta sly sot ath gma bra vvi ppo mtr ghi ghi ghi cit osa bdi
Symbol LOC107817039 LOC107803788 LOC101243676 LOC107061653 OTP70 LOC112997711 LOC103863081 LOC100241682 LOC7476750 LOC25489190 LOC107946850 LOC107933481 LOC107900108 LOC112499593 LOC4334814 LOC100824336
Function* pentatricopeptide repeat-containing protein At4g25270, chloroplastic-like pentatricopeptide repeat-containing protein At4g25270, chloroplastic-like pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At4g25270, chloroplastic Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At4g25270, chloroplastic pentatricopeptide repeat-containing protein At4g25270, chloroplastic pentatricopeptide repeat-containing protein At4g25270, chloroplastic pentatricopeptide repeat-containing protein At4g25270, chloroplastic pentatricopeptide repeat-containing protein At4g25270, chloroplastic pentatricopeptide repeat-containing protein At4g25270, chloroplastic-like pentatricopeptide repeat-containing protein At4g25270, chloroplastic pentatricopeptide repeat-containing protein At4g25270, chloroplastic pentatricopeptide repeat-containing protein At4g25270, chloroplastic pentatricopeptide repeat-containing protein At4g25270, chloroplastic pentatricopeptide repeat-containing protein At4g25270, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107817039 107803788 101243676 107061653 828630 112997711 103863081 100241682 7476750 25489190 107946850 107933481 107900108 112499593 4334814 100824336
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