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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107820399   uncharacterized LOC107820399 
 sly-u.5   101254448   E3 ubiquitin-protein ligase CIP8 
 sly-u.5   101264712   uncharacterized LOC101264712 
 sly-u.5   101246882   E3 ubiquitin-protein ligase CIP8-like 
 ath-u.5   AT5G08139   RING/U-box superfamily protein 
 ath-u.5   AT5G60820   RING/U-box superfamily protein 
 gma-u.5   100814798   E3 ubiquitin-protein ligase CIP8 
 gma-u.5   100812037   E3 ubiquitin-protein ligase CIP8 
 gma-u.5   100789524   E3 ubiquitin-protein ligase Praja-2 
 vvi-u.5   104881617   E3 ubiquitin ligase BIG BROTHER-related 
 vvi-u.5   100268065   uncharacterized LOC100268065 
 ppo-u.5   7453865   E3 ubiquitin-protein ligase CIP8 
 ppo-u.5   7487122   uncharacterized LOC7487122 
 mtr-u.5   25495490   E3 ubiquitin-protein ligase CIP8 
 mtr-u.5   25493924   uncharacterized LOC25493924 
 osa-u.5   9268797   E3 ubiquitin-protein ligase CIP8 
 zma-u.5   100217052   putative RING zinc finger domain superfamily protein 

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Top 50 coexpressed genes to 107820399 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107820399 (nta-r.1 coexpression data)

CoexMap"107820399"


ntaLOC107820399 | Entrez gene ID : 107820399      
Species nta sly ath gma vvi ppo mtr osa zma hvu bna cit bra ghi sbi bdi tae cre sot
Paralog 1 3 2 3 2 2 2 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (573 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (8458 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (368 genes)  IEA  
Protein XP_016502168.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 1,  plas 1,  pero 1,  cysk 1,  cysk_plas 1,  cyto_E.R. 1  (predict for XP_016502168.1)
Subcellular
localization
TargetP
other 7  (predict for XP_016502168.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107820399
sly-u.5
for
101254448
sly-u.5
for
101264712
sly-u.5
for
101246882
ath-u.5
for
AT5G08139
ath-u.5
for
AT5G60820
gma-u.5
for
100814798
gma-u.5
for
100812037
gma-u.5
for
100789524
vvi-u.5
for
104881617
vvi-u.5
for
100268065
ppo-u.5
for
7453865
ppo-u.5
for
7487122
mtr-u.5
for
25495490
mtr-u.5
for
25493924
osa-u.5
for
9268797
zma-u.5
for
100217052


Ortholog ID: 4435
Species nta nta sly sly sot sot ath ath gma gma bra vvi vvi ppo ppo mtr mtr ghi ghi bna bna cit osa zma tae tae hvu sbi bdi
Symbol LOC107820399 LOC107814792 LOC101254448 LOC101264712 LOC102596873 LOC102594265 AT5G60820 AT5G08139 LOC100812037 LOC100789524 LOC103860540 LOC100268065 LOC104881617 LOC7487122 LOC7453865 LOC25493924 LOC25495490 LOC107893776 LOC107949757 LOC106419504 LOC106377267 LOC102607084 LOC9268797 LOC100217052 LOC123141735 LOC123134459 LOC123402340 LOC8071742 LOC100832254
Function* uncharacterized LOC107820399 uncharacterized LOC107814792 E3 ubiquitin-protein ligase CIP8 uncharacterized LOC101264712 E3 ubiquitin-protein ligase Praja-2-like E3 ubiquitin-protein ligase RNF181 RING/U-box superfamily protein RING/U-box superfamily protein E3 ubiquitin-protein ligase CIP8 E3 ubiquitin-protein ligase Praja-2 uncharacterized LOC103860540 uncharacterized LOC100268065 E3 ubiquitin ligase BIG BROTHER-related uncharacterized LOC7487122 E3 ubiquitin-protein ligase CIP8 uncharacterized LOC25493924 E3 ubiquitin-protein ligase CIP8 E3 ubiquitin-protein ligase CIP8 uncharacterized LOC107949757 E3 ubiquitin-protein ligase CIP8 uncharacterized LOC106377267 uncharacterized LOC102607084 E3 ubiquitin-protein ligase CIP8 putative RING zinc finger domain superfamily protein E3 ubiquitin-protein ligase CIP8 E3 ubiquitin-protein ligase CIP8 E3 ubiquitin ligase BIG BROTHER-related-like E3 ubiquitin-protein ligase CIP8 E3 ubiquitin-protein ligase CIP8
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 3
gma03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 3
gma03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00920 Sulfur metabolism 2
vvi03008 Ribosome biogenesis in eukaryotes 2
vvi03083 Polycomb repressive complex 2
vvi04712 Circadian rhythm - plant 2
vvi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00910 Nitrogen metabolism 3
osa01310 Nitrogen cycle 3
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 3
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 3
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00940 Phenylpropanoid biosynthesis 3
sbi04145 Phagosome 3
sbi04517 IgSF CAM signaling 3
sbi04814 Motor proteins 3
sbi00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00520 Amino sugar and nucleotide sugar metabolism 3
bdi00053 Ascorbate and aldarate metabolism 2
bdi01240 Biosynthesis of cofactors 2
bdi01250 Biosynthesis of nucleotide sugars 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107820399 107814792 101254448 101264712 102596873 102594265 836203 830709 100812037 100789524 103860540 100268065 104881617 7487122 7453865 25493924 25495490 107893776 107949757 106419504 106377267 102607084 9268797 100217052 123141735 123134459 123402340 8071742 100832254
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