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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123402340   E3 ubiquitin ligase BIG BROTHER-related-like 
 tae-r.2   123141735   E3 ubiquitin-protein ligase CIP8 
 tae-r.2   123134459   E3 ubiquitin-protein ligase CIP8 
 bdi-r.1   100832254   E3 ubiquitin-protein ligase CIP8 
 osa-u.5   9268797   E3 ubiquitin-protein ligase CIP8 
 zma-u.5   100217052   putative RING zinc finger domain superfamily protein 
 sbi-r.1   8071742   E3 ubiquitin-protein ligase CIP8 
 ath-u.5   AT5G08139   RING/U-box superfamily protein 
 ath-u.5   AT5G60820   RING/U-box superfamily protein 
 gma-u.5   100814798   E3 ubiquitin-protein ligase CIP8 
 gma-u.5   100812037   E3 ubiquitin-protein ligase CIP8 
 gma-u.5   100789524   E3 ubiquitin-protein ligase Praja-2 
 sly-u.5   101254448   E3 ubiquitin-protein ligase CIP8 
 sly-u.5   101264712   uncharacterized LOC101264712 
 sly-u.5   101246882   E3 ubiquitin-protein ligase CIP8-like 
 bra-r.6   103847578   E3 ubiquitin-protein ligase CIP8 
 bra-r.6   103855760   E3 ubiquitin-protein ligase CIP8 
 vvi-u.5   104881617   E3 ubiquitin ligase BIG BROTHER-related 
 vvi-u.5   100268065   uncharacterized LOC100268065 
 ppo-u.5   7453865   E3 ubiquitin-protein ligase CIP8 
 ppo-u.5   7487122   uncharacterized LOC7487122 
 mtr-u.5   25495490   E3 ubiquitin-protein ligase CIP8 
 mtr-u.5   25493924   uncharacterized LOC25493924 
 ghi-r.1   107893776   E3 ubiquitin-protein ligase CIP8 
 ghi-r.1   107949757   uncharacterized LOC107949757 
 ghi-r.1   107949760   uncharacterized LOC107949760 
 bna-r.1   106434617   uncharacterized LOC106434617 
 bna-r.1   125584051   E3 ubiquitin-protein ligase CIP8-like 
 bna-r.1   106433886   E3 ubiquitin-protein ligase CIP8-like 
 sot-r.1   102578405   uncharacterized LOC102578405 
 sot-r.1   102594265   E3 ubiquitin-protein ligase RNF181 
 sot-r.1   102596873   E3 ubiquitin-protein ligase Praja-2-like 
 cit-r.1   102607084   uncharacterized LOC102607084 
 nta-r.1   107820399   uncharacterized LOC107820399 
 nta-r.1   107814792   uncharacterized LOC107814792 
 nta-r.1   107795337   uncharacterized LOC107795337 

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Top 50 coexpressed genes to 123402340 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123402340 (hvu-r.1 coexpression data)

CoexMap"123402340"


hvuLOC123402340 | Entrez gene ID : 123402340    
Species hvu tae bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 2 1 1 1 1 2 3 3 2 2 2 2 3 3 3 1 3 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (478 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (5514 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (217 genes)  IEA  
Protein XP_044952180.1 [sequence] [blastp]
Subcellular
localization
wolf
extr 6,  chlo 3,  cyto 1,  mito 1  (predict for XP_044952180.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_044952180.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123402340
tae-r.2
for
123141735
tae-r.2
for
123134459
bdi-r.1
for
100832254
osa-u.5
for
9268797
zma-u.5
for
100217052
sbi-r.1
for
8071742
ath-u.5
for
AT5G08139
ath-u.5
for
AT5G60820
gma-u.5
for
100814798
gma-u.5
for
100812037
gma-u.5
for
100789524
sly-u.5
for
101254448
sly-u.5
for
101264712
sly-u.5
for
101246882
bra-r.6
for
103847578
bra-r.6
for
103855760
vvi-u.5
for
104881617
vvi-u.5
for
100268065
ppo-u.5
for
7453865
ppo-u.5
for
7487122
mtr-u.5
for
25495490
mtr-u.5
for
25493924
ghi-r.1
for
107893776
ghi-r.1
for
107949757
ghi-r.1
for
107949760
bna-r.1
for
106434617
bna-r.1
for
125584051
bna-r.1
for
106433886
sot-r.1
for
102578405
sot-r.1
for
102594265
sot-r.1
for
102596873
cit-r.1
for
102607084
nta-r.1
for
107820399
nta-r.1
for
107814792
nta-r.1
for
107795337


Ortholog ID: 4435
Species hvu tae tae bdi osa zma sbi ath ath gma gma gma sly sly sly bra bra vvi vvi ppo ppo mtr mtr ghi ghi ghi bna bna bna sot sot sot cit nta nta nta
Symbol LOC123402340 LOC123141735 LOC123134459 LOC100832254 LOC9268797 LOC100217052 LOC8071742 AT5G08139 AT5G60820 LOC100812037 LOC100789524 LOC100794303 LOC101254448 LOC101264712 LOC101246882 LOC103855760 LOC103860540 LOC104881617 LOC100268065 LOC7453865 LOC7487122 LOC25495490 LOC25493924 LOC107893776 LOC107949757 LOC107949760 LOC106434617 LOC106419504 LOC106377267 LOC102578405 LOC102594265 LOC102596873 LOC102607084 LOC107820399 LOC107814792 LOC107795337
Function* E3 ubiquitin ligase BIG BROTHER-related-like E3 ubiquitin-protein ligase CIP8 E3 ubiquitin-protein ligase CIP8 E3 ubiquitin-protein ligase CIP8 E3 ubiquitin-protein ligase CIP8 putative RING zinc finger domain superfamily protein E3 ubiquitin-protein ligase CIP8 RING/U-box superfamily protein RING/U-box superfamily protein E3 ubiquitin-protein ligase CIP8 E3 ubiquitin-protein ligase Praja-2 E3 ubiquitin-protein ligase CIP8 E3 ubiquitin-protein ligase CIP8 uncharacterized LOC101264712 E3 ubiquitin-protein ligase CIP8-like E3 ubiquitin-protein ligase CIP8 uncharacterized LOC103860540 E3 ubiquitin ligase BIG BROTHER-related uncharacterized LOC100268065 E3 ubiquitin-protein ligase CIP8 uncharacterized LOC7487122 E3 ubiquitin-protein ligase CIP8 uncharacterized LOC25493924 E3 ubiquitin-protein ligase CIP8 uncharacterized LOC107949757 uncharacterized LOC107949760 uncharacterized LOC106434617 E3 ubiquitin-protein ligase CIP8 uncharacterized LOC106377267 uncharacterized LOC102578405 E3 ubiquitin-protein ligase RNF181 E3 ubiquitin-protein ligase Praja-2-like uncharacterized LOC102607084 uncharacterized LOC107820399 uncharacterized LOC107814792 uncharacterized LOC107795337
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 3
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 3
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00520 Amino sugar and nucleotide sugar metabolism 3
bdi00053 Ascorbate and aldarate metabolism 2
bdi01240 Biosynthesis of cofactors 2
bdi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00910 Nitrogen metabolism 3
osa01310 Nitrogen cycle 3
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00940 Phenylpropanoid biosynthesis 3
sbi04145 Phagosome 3
sbi04517 IgSF CAM signaling 3
sbi04814 Motor proteins 3
sbi00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 3
gma03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 3
gma03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
bra04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00920 Sulfur metabolism 2
vvi03008 Ribosome biogenesis in eukaryotes 2
vvi03083 Polycomb repressive complex 2
vvi04712 Circadian rhythm - plant 2
vvi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 4
nta03250 Viral life cycle - HIV-1 2
nta03272 Virion - Hepatitis viruses 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123402340 123141735 123134459 100832254 9268797 100217052 8071742 830709 836203 100812037 100789524 100794303 101254448 101264712 101246882 103855760 103860540 104881617 100268065 7453865 7487122 25495490 25493924 107893776 107949757 107949760 106434617 106419504 106377267 102578405 102594265 102596873 102607084 107820399 107814792 107795337
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