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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107822701   uncharacterized LOC107822701 
 nta-r.1   107809623   uncharacterized LOC107809623 
 sly-u.5   101246042   pentatricopeptide repeat-containing protein 
 sot-r.1   102586548   pentatricopeptide repeat-containing protein At3g04760, chloroplastic 
 ath-u.5   AT3G04760   Pentatricopeptide repeat (PPR-like) superfamily protein 
 gma-u.5   100812545   pentatricopeptide repeat-containing protein At3g04760, chloroplastic 
 gma-u.5   100806999   pentatricopeptide repeat-containing protein At3g04760, chloroplastic 
 gma-u.5   100798097   pentatricopeptide repeat-containing protein At3g04760, chloroplastic 
 bra-r.6   103849142   pentatricopeptide repeat-containing protein At3g04760, chloroplastic 
 vvi-u.5   100255274   pentatricopeptide repeat-containing protein At3g04760, chloroplastic 
 ppo-u.5   18104091   pentatricopeptide repeat-containing protein At3g04760, chloroplastic 
 ppo-u.5   18108177   pentatricopeptide repeat-containing protein At3g04760, chloroplastic 
 mtr-u.5   11413581   pentatricopeptide repeat-containing protein At3g04760, chloroplastic 
 ghi-r.1   107892830   pentatricopeptide repeat-containing protein At3g04760, chloroplastic 
 ghi-r.1   107926841   pentatricopeptide repeat-containing protein At3g04760, chloroplastic 
 bna-r.1   106453085   pentatricopeptide repeat-containing protein At3g04760, chloroplastic 
 bna-r.1   106427413   pentatricopeptide repeat-containing protein At3g04760, chloroplastic 
 cit-r.1   102607585   pentatricopeptide repeat-containing protein At3g04760, chloroplastic-like 

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Top 50 coexpressed genes to 107822701 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107822701 (nta-r.1 coexpression data)

CoexMap"107822701"


ntaLOC107822701 | Entrez gene ID : 107822701    
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit bdi osa tae zma cre sbi hvu
Paralog 2 1 1 1 3 1 1 2 1 2 2 1 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016504747.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  chlo_mito 5  (predict for XP_016504747.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_016504747.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107822701
nta-r.1
for
107809623
sly-u.5
for
101246042
sot-r.1
for
102586548
ath-u.5
for
AT3G04760
gma-u.5
for
100812545
gma-u.5
for
100806999
gma-u.5
for
100798097
bra-r.6
for
103849142
vvi-u.5
for
100255274
ppo-u.5
for
18104091
ppo-u.5
for
18108177
mtr-u.5
for
11413581
ghi-r.1
for
107892830
ghi-r.1
for
107926841
bna-r.1
for
106453085
bna-r.1
for
106427413
cit-r.1
for
102607585


Ortholog ID: 12650
Species nta nta sly sot ath gma gma gma bra vvi ppo ppo mtr ghi ghi bna bna cit
Symbol LOC107822701 LOC107809623 LOC101246042 LOC102586548 AT3G04760 LOC100812545 LOC100806999 LOC100798097 LOC103849142 LOC100255274 LOC18104091 LOC18108177 LOC11413581 LOC107892830 LOC107926841 LOC106453085 LOC106427413 LOC102607585
Function* uncharacterized LOC107822701 uncharacterized LOC107809623 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At3g04760, chloroplastic Pentatricopeptide repeat (PPR-like) superfamily protein pentatricopeptide repeat-containing protein At3g04760, chloroplastic pentatricopeptide repeat-containing protein At3g04760, chloroplastic pentatricopeptide repeat-containing protein At3g04760, chloroplastic pentatricopeptide repeat-containing protein At3g04760, chloroplastic pentatricopeptide repeat-containing protein At3g04760, chloroplastic pentatricopeptide repeat-containing protein At3g04760, chloroplastic pentatricopeptide repeat-containing protein At3g04760, chloroplastic pentatricopeptide repeat-containing protein At3g04760, chloroplastic pentatricopeptide repeat-containing protein At3g04760, chloroplastic pentatricopeptide repeat-containing protein At3g04760, chloroplastic pentatricopeptide repeat-containing protein At3g04760, chloroplastic pentatricopeptide repeat-containing protein At3g04760, chloroplastic pentatricopeptide repeat-containing protein At3g04760, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 11
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
gma01240 Biosynthesis of cofactors 2
gma00053 Ascorbate and aldarate metabolism 2
gma00480 Glutathione metabolism 2
gma00460 Cyanoamino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 8
mtr00860 Porphyrin metabolism 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107822701 107809623 101246042 102586548 819636 100812545 100806999 100798097 103849142 100255274 18104091 18108177 11413581 107892830 107926841 106453085 106427413 102607585
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