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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   142178834   pentatricopeptide repeat-containing protein At5g27110-like 
 sly-u.5   101257516   pentatricopeptide repeat-containing protein At5g27110 
 sot-r.1   102600898   pentatricopeptide repeat-containing protein At5g27110 
 ath-u.5   AT5G27110   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100819187   pentatricopeptide repeat-containing protein At5g27110 
 gma-u.5   100817231   pentatricopeptide repeat-containing protein At5g27110 
 vvi-u.5   100246628   pentatricopeptide repeat-containing protein At5g27110 
 vvi-u.5   104878995   pentatricopeptide repeat-containing protein At3g09040, mitochondrial 
 mtr-u.5   11436008   pentatricopeptide repeat-containing protein At5g27110 
 ghi-r.1   107938359   pentatricopeptide repeat-containing protein At5g27110 
 cit-r.1   102612538   pentatricopeptide repeat-containing protein At5g27110 
 osa-u.5   4325920   pentatricopeptide repeat-containing protein At3g22690 
 bdi-r.1   100837674   pentatricopeptide repeat-containing protein At3g22690 

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Top 50 coexpressed genes to 142178834 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 142178834 (nta-r.1 coexpression data)

CoexMap"107828934"


ntaLOC107828934 | Entrez gene ID : 107828934      
Species nta sly sot ath gma vvi mtr ghi cit osa bdi tae bna ppo zma cre sbi bra hvu
Paralog 1 1 1 1 2 2 1 1 1 1 1 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (9561 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016511815.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  mito 1,  E.R. 1,  golg 1,  cyto 1,  plas 1,  vacu 1,  chlo_mito 1,  cyto_mito 1,  cyto_plas 1  (predict for XP_016511815.2)
Subcellular
localization
TargetP
other 4  (predict for XP_016511815.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
142178834
sly-u.5
for
101257516
sot-r.1
for
102600898
ath-u.5
for
AT5G27110
gma-u.5
for
100819187
gma-u.5
for
100817231
vvi-u.5
for
100246628
vvi-u.5
for
104878995
mtr-u.5
for
11436008
ghi-r.1
for
107938359
cit-r.1
for
102612538
osa-u.5
for
4325920
bdi-r.1
for
100837674


Ortholog ID: 12677
Species nta sly sot ath gma gma vvi vvi mtr ghi cit osa bdi
Symbol LOC142178834 LOC101257516 LOC102600898 AT5G27110 LOC100819187 LOC100817231 LOC100246628 LOC104878995 LOC11436008 LOC107938359 LOC102612538 LOC4325920 LOC100837674
Function* pentatricopeptide repeat-containing protein At5g27110-like pentatricopeptide repeat-containing protein At5g27110 pentatricopeptide repeat-containing protein At5g27110 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At5g27110 pentatricopeptide repeat-containing protein At5g27110 pentatricopeptide repeat-containing protein At5g27110 pentatricopeptide repeat-containing protein At3g09040, mitochondrial pentatricopeptide repeat-containing protein At5g27110 pentatricopeptide repeat-containing protein At5g27110 pentatricopeptide repeat-containing protein At5g27110 pentatricopeptide repeat-containing protein At3g22690 pentatricopeptide repeat-containing protein At3g22690
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 142178834 101257516 102600898 832769 100819187 100817231 100246628 104878995 11436008 107938359 102612538 4325920 100837674
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