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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107830909   uncharacterized LOC107830909 
 nta-r.1   107798558   uncharacterized LOC107798558 
 sly-u.5   101260904   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 sly-u.5   101254025   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 sot-r.1   102602316   uncharacterized CRM domain-containing protein At3g25440, chloroplastic-like 
 sot-r.1   102582601   uncharacterized CRM domain-containing protein At3g25440, chloroplastic-like 
 ath-u.5   AT2G28480   RNA-binding CRS1 / YhbY (CRM) domain protein 
 gma-u.5   100796393   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 bra-r.6   103858294   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 vvi-u.5   100250974   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 ppo-u.5   7469584   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 mtr-u.5   25492670   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 ghi-r.1   107957179   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 ghi-r.1   107890542   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 bna-r.1   BNAC03G46860D   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 bna-r.1   125575023   uncharacterized CRM domain-containing protein At3g25440, chloroplastic-like 
 cit-r.1   102624888   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 osa-u.5   4325389   CRM-domain containing factor CFM9, mitochondrial 
 zma-u.5   100284661   CFM6 
 tae-r.2   123063503   CRM-domain containing factor CFM9, mitochondrial 
 tae-r.2   123072596   CRM-domain containing factor CFM9, mitochondrial 
 tae-r.2   123080789   CRM-domain containing factor CFM9, mitochondrial 
 hvu-r.1   123445568   CRM-domain containing factor CFM9, mitochondrial 
 sbi-r.1   8077383   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 bdi-r.1   100829186   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 

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Top 50 coexpressed genes to 107830909 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107830909 (nta-r.1 coexpression data)

CoexMap"107830909"


ntaLOC107830909 | Entrez gene ID : 107830909      
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 2 2 1 1 1 1 1 1 2 2 1 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
Protein XP_016514078.1 [sequence] [blastp]
XP_075078890.1 [sequence] [blastp]
XP_075078891.1 [sequence] [blastp]
XP_075078892.1 [sequence] [blastp]
XP_075078893.1 [sequence] [blastp]
XP_075078894.1 [sequence] [blastp]
XP_075078895.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo_mito 4,  chlo 4  (predict for XP_016514078.1)
mito 4,  chlo_mito 4,  chlo 4  (predict for XP_075078890.1)
mito 4,  chlo_mito 4,  chlo 4  (predict for XP_075078891.1)
mito 4,  chlo_mito 4,  chlo 4  (predict for XP_075078892.1)
mito 4,  chlo_mito 4,  chlo 4  (predict for XP_075078893.1)
mito 5,  chlo 4,  nucl 1  (predict for XP_075078894.1)
mito 5,  chlo 4,  nucl 1  (predict for XP_075078895.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_016514078.1)
mito 8  (predict for XP_075078890.1)
mito 8  (predict for XP_075078891.1)
mito 8  (predict for XP_075078892.1)
mito 8  (predict for XP_075078893.1)
mito 9  (predict for XP_075078894.1)
mito 9  (predict for XP_075078895.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107830909
nta-r.1
for
107798558
sly-u.5
for
101260904
sly-u.5
for
101254025
sot-r.1
for
102602316
sot-r.1
for
102582601
ath-u.5
for
AT2G28480
gma-u.5
for
100796393
bra-r.6
for
103858294
vvi-u.5
for
100250974
ppo-u.5
for
7469584
mtr-u.5
for
25492670
ghi-r.1
for
107957179
ghi-r.1
for
107890542
bna-r.1
for
BNAC03G46860D
bna-r.1
for
125575023
cit-r.1
for
102624888
osa-u.5
for
4325389
zma-u.5
for
100284661
tae-r.2
for
123063503
tae-r.2
for
123072596
tae-r.2
for
123080789
hvu-r.1
for
123445568
sbi-r.1
for
8077383
bdi-r.1
for
100829186


Ortholog ID: 8893
Species nta nta sly sly sot sot ath gma bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae tae hvu sbi bdi
Symbol LOC107830909 LOC107798558 LOC101260904 LOC101254025 LOC102602316 LOC102582601 AT2G28480 LOC100796393 LOC103858294 LOC100250974 LOC7469584 LOC25492670 LOC107957179 LOC107890542 BNAC03G46860D LOC125575023 LOC102624888 LOC4325389 LOC100284661 LOC123063503 LOC123072596 LOC123080789 LOC123445568 LOC8077383 LOC100829186
Function* uncharacterized LOC107830909 uncharacterized LOC107798558 uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic-like uncharacterized CRM domain-containing protein At3g25440, chloroplastic-like RNA-binding CRS1 / YhbY (CRM) domain protein uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic-like uncharacterized CRM domain-containing protein At3g25440, chloroplastic CRM-domain containing factor CFM9, mitochondrial CFM6 CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 3
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly03013 Nucleocytoplasmic transport 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04145 Phagosome 2
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03420 Nucleotide excision repair 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 6
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107830909 107798558 101260904 101254025 102602316 102582601 817396 100796393 103858294 100250974 7469584 25492670 107957179 107890542 106430498 125575023 102624888 4325389 100284661 123063503 123072596 123080789 123445568 8077383 100829186
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