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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4325389   CRM-domain containing factor CFM9, mitochondrial 
 osa-r.6   4325389   CRM-domain containing factor CFM9, mitochondrial 
 osa-m.8   4325389   CRM-domain containing factor CFM9, mitochondrial 
 osa-e.1   4325389   CRM-domain containing factor CFM9, mitochondrial 
 zma-u.5   100284661   CFM6 
 ath-u.5   AT2G28480   RNA-binding CRS1 / YhbY (CRM) domain protein 
 gma-u.5   100796393   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 sly-u.5   101260904   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 sly-u.5   101254025   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 vvi-u.5   100250974   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 ppo-u.5   7469584   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 mtr-u.5   25492670   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 

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Top 50 coexpressed genes to 4325389 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4325389 (osa-u.5 coexpression data)

CoexMap"4325389"


osaLOC4325389 | Entrez gene ID : 4325389      
Species osa zma ath gma sly vvi ppo mtr tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 4 1 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1223 genes)  IEA  
Protein XP_015622487.1 [sequence] [blastp]
XP_066162903.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  chlo_mito 5,  mito 1  (predict for XP_015622487.1)
chlo 8,  chlo_mito 5,  mito 1  (predict for XP_066162903.1)
Subcellular
localization
TargetP
mito 7,  chlo 4  (predict for XP_015622487.1)
mito 7,  chlo 4  (predict for XP_066162903.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4325389

.
osa-r.6
for
4325389

.
osa-m.8
for
4325389

.
osa-e.1
for
4325389

.
zma-u.5
for
100284661

.
ath-u.5
for
AT2G28480

.
gma-u.5
for
100796393

.
sly-u.5
for
101260904

.
sly-u.5
for
101254025

.
vvi-u.5
for
100250974

.
ppo-u.5
for
7469584

.
mtr-u.5
for
25492670

.


Ortholog ID: 8893
Species ath gma sly sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot sot cit bdi nta nta
Symbol AT2G28480 LOC100796393 LOC101260904 LOC101254025 LOC4325389 LOC100284661 LOC103858294 LOC100250974 LOC7469584 LOC25492670 LOC123072596 LOC123080789 LOC123445568 LOC107890542 LOC107957179 BNAC03G46860D LOC125575023 LOC8077383 LOC102582601 LOC102602316 LOC102624888 LOC100829186 LOC107798558 LOC107830909
Function* RNA-binding CRS1 / YhbY (CRM) domain protein uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic CRM-domain containing factor CFM9, mitochondrial CFM6 uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic-like uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic-like uncharacterized CRM domain-containing protein At3g25440, chloroplastic-like uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized LOC107798558 uncharacterized LOC107830909
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly03013 Nucleocytoplasmic transport 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04145 Phagosome 2
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03420 Nucleotide excision repair 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 6
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 3
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
nta03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817396 100796393 101260904 101254025 4325389 100284661 103858294 100250974 7469584 25492670 123072596 123080789 123445568 107890542 107957179 106430498 125575023 8077383 102582601 102602316 102624888 100829186 107798558 107830909
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