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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123080789   CRM-domain containing factor CFM9, mitochondrial 
 tae-r.2   123063503   CRM-domain containing factor CFM9, mitochondrial 
 tae-r.2   123072596   CRM-domain containing factor CFM9, mitochondrial 
 hvu-r.1   123445568   CRM-domain containing factor CFM9, mitochondrial 
 bdi-r.1   100829186   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 osa-u.5   4325389   CRM-domain containing factor CFM9, mitochondrial 
 zma-u.5   100284661   CFM6 
 sbi-r.1   8077383   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 ath-u.5   AT2G28480   RNA-binding CRS1 / YhbY (CRM) domain protein 
 gma-u.5   100796393   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 sly-u.5   101254025   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 sly-u.5   101260904   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 bra-r.6   103858294   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 vvi-u.5   100250974   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 ppo-u.5   7469584   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 mtr-u.5   25492670   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 ghi-r.1   107957179   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 ghi-r.1   107890542   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 bna-r.1   BNAC03G46860D   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 bna-r.1   125575023   uncharacterized CRM domain-containing protein At3g25440, chloroplastic-like 
 sot-r.1   102602316   uncharacterized CRM domain-containing protein At3g25440, chloroplastic-like 
 sot-r.1   102582601   uncharacterized CRM domain-containing protein At3g25440, chloroplastic-like 
 cit-r.1   102624888   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 nta-r.1   107798558   uncharacterized LOC107798558 
 nta-r.1   107830909   uncharacterized LOC107830909 

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Top 50 coexpressed genes to 123080789 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123080789 (tae-r.2 coexpression data)

CoexMap"123080789"


taeLOC123080789 | Entrez gene ID : 123080789    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 1 1 1 1 1 2 1 1 1 1 2 2 2 1 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (4004 genes)  IEA  
Protein XP_044359673.1 [sequence] [blastp]
XP_044359674.1 [sequence] [blastp]
XP_044359675.1 [sequence] [blastp]
XP_044359676.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 5,  mito 2  (predict for XP_044359673.1)
chlo 6,  chlo_mito 5,  mito 2  (predict for XP_044359674.1)
chlo 6,  chlo_mito 5,  mito 2  (predict for XP_044359675.1)
chlo 6,  chlo_mito 5,  mito 2  (predict for XP_044359676.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_044359673.1)
mito 8  (predict for XP_044359674.1)
mito 7  (predict for XP_044359675.1)
mito 7  (predict for XP_044359676.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123080789
tae-r.2
for
123063503
tae-r.2
for
123072596
hvu-r.1
for
123445568
bdi-r.1
for
100829186
osa-u.5
for
4325389
zma-u.5
for
100284661
sbi-r.1
for
8077383
ath-u.5
for
AT2G28480
gma-u.5
for
100796393
sly-u.5
for
101254025
sly-u.5
for
101260904
bra-r.6
for
103858294
vvi-u.5
for
100250974
ppo-u.5
for
7469584
mtr-u.5
for
25492670
ghi-r.1
for
107957179
ghi-r.1
for
107890542
bna-r.1
for
BNAC03G46860D
bna-r.1
for
125575023
sot-r.1
for
102602316
sot-r.1
for
102582601
cit-r.1
for
102624888
nta-r.1
for
107798558
nta-r.1
for
107830909


Ortholog ID: 8893
Species tae tae tae hvu bdi osa zma sbi ath gma sly sly bra vvi ppo mtr ghi ghi bna bna sot sot cit nta nta
Symbol LOC123080789 LOC123063503 LOC123072596 LOC123445568 LOC100829186 LOC4325389 LOC100284661 LOC8077383 AT2G28480 LOC100796393 LOC101254025 LOC101260904 LOC103858294 LOC100250974 LOC7469584 LOC25492670 LOC107957179 LOC107890542 BNAC03G46860D LOC125575023 LOC102602316 LOC102582601 LOC102624888 LOC107798558 LOC107830909
Function* CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial uncharacterized CRM domain-containing protein At3g25440, chloroplastic CRM-domain containing factor CFM9, mitochondrial CFM6 uncharacterized CRM domain-containing protein At3g25440, chloroplastic RNA-binding CRS1 / YhbY (CRM) domain protein uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic-like uncharacterized CRM domain-containing protein At3g25440, chloroplastic-like uncharacterized CRM domain-containing protein At3g25440, chloroplastic-like uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized LOC107798558 uncharacterized LOC107830909
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 6
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly03013 Nucleocytoplasmic transport 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04145 Phagosome 2
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03420 Nucleotide excision repair 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 3
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
nta03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123080789 123063503 123072596 123445568 100829186 4325389 100284661 8077383 817396 100796393 101254025 101260904 103858294 100250974 7469584 25492670 107957179 107890542 106430498 125575023 102602316 102582601 102624888 107798558 107830909
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