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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107832193   periodic tryptophan protein 2 
 nta-r.1   107769830   periodic tryptophan protein 2 
 sly-u.5   101252265   periodic tryptophan protein 2 
 sot-r.1   102587545   periodic tryptophan protein 2 homolog 
 ath-u.5   PWP2   periodic tryptophan protein 2 
 gma-u.5   100793629   periodic tryptophan protein 2 
 gma-u.5   100526905   periodic tryptophan protein 2 
 bra-r.6   103872338   periodic tryptophan protein 2 
 bra-r.6   103836025   periodic tryptophan protein 2 
 vvi-u.5   100241131   periodic tryptophan protein 2 
 ppo-u.5   7478120   periodic tryptophan protein 2 
 ppo-u.5   7475720   periodic tryptophan protein 2 
 mtr-u.5   11431644   periodic tryptophan protein 2 
 ghi-r.1   121206106   periodic tryptophan protein 2 
 ghi-r.1   107891682   periodic tryptophan protein 2 
 bna-r.1   106452315   periodic tryptophan protein 2 
 bna-r.1   106406808   periodic tryptophan protein 2 
 bna-r.1   106387562   periodic tryptophan protein 2 
 cit-r.1   102614962   periodic tryptophan protein 2 
 osa-u.5   4339341   periodic tryptophan protein 2 
 zma-u.5   100191510   periodic tryptophan protein 2 
 tae-r.2   123140460   periodic tryptophan protein 2 
 tae-r.2   123063429   periodic tryptophan protein 2 
 tae-r.2   123182659   periodic tryptophan protein 2 
 hvu-r.1   123450046   periodic tryptophan protein 2 
 sbi-r.1   8082990   periodic tryptophan protein 2 homolog 
 bdi-r.1   100826227   periodic tryptophan protein 2 
 cre-r.1   CHLRE_06g254150v5   uncharacterized protein 

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Top 50 coexpressed genes to 107832193 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107832193 (nta-r.1 coexpression data)

CoexMap"107832193"


ntaLOC107832193 | Entrez gene ID : 107832193      
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 1 1 1 2 2 1 2 1 2 3 1 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG nta03008 [list] [network] Ribosome biogenesis in eukaryotes (157 genes)
GO BP
GO:0000028 [list] [network] ribosomal small subunit assembly  (27 genes)  IEA  
GO:0000462 [list] [network] maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (57 genes)  IEA  
GO CC
GO:0034388 [list] [network] Pwp2p-containing subcomplex of 90S preribosome  (13 genes)  IEA  
GO:0032040 [list] [network] small-subunit processome  (85 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016515491.2 [sequence] [blastp]
XP_016515492.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  cyto 1,  mito 1,  plas 1,  cyto_nucl 1,  cyto_pero 1,  mito_plas 1,  cyto_E.R. 1  (predict for XP_016515491.2)
chlo 7,  cyto 1,  mito 1,  plas 1,  cyto_nucl 1,  cyto_pero 1,  mito_plas 1,  cyto_E.R. 1  (predict for XP_016515492.2)
Subcellular
localization
TargetP
mito 5  (predict for XP_016515491.2)
mito 5  (predict for XP_016515492.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107832193
nta-r.1
for
107769830
sly-u.5
for
101252265
sot-r.1
for
102587545
ath-u.5
for
PWP2
gma-u.5
for
100793629
gma-u.5
for
100526905
bra-r.6
for
103872338
bra-r.6
for
103836025
vvi-u.5
for
100241131
ppo-u.5
for
7478120
ppo-u.5
for
7475720
mtr-u.5
for
11431644
ghi-r.1
for
121206106
ghi-r.1
for
107891682
bna-r.1
for
106452315
bna-r.1
for
106406808
bna-r.1
for
106387562
cit-r.1
for
102614962
osa-u.5
for
4339341
zma-u.5
for
100191510
tae-r.2
for
123140460
tae-r.2
for
123063429
tae-r.2
for
123182659
hvu-r.1
for
123450046
sbi-r.1
for
8082990
bdi-r.1
for
100826227
cre-r.1
for
CHLRE_06g254150v5


Ortholog ID: 8235
Species nta nta sly sot ath gma gma bra bra vvi ppo ppo mtr ghi ghi bna bna bna cit osa zma tae tae tae hvu sbi bdi cre
Symbol LOC107832193 LOC107769830 LOC101252265 LOC102587545 PWP2 LOC100793629 LOC100526905 LOC103872338 LOC103836025 LOC100241131 LOC7478120 LOC7475720 LOC11431644 LOC121206106 LOC107891682 LOC106452315 LOC106406808 LOC106387562 LOC102614962 LOC4339341 LOC100191510 LOC123140460 LOC123063429 LOC123182659 LOC123450046 LOC8082990 LOC100826227 CHLRE_06g254150v5
Function* periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 homolog periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 homolog periodic tryptophan protein 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta03030 DNA replication 2
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta03030 DNA replication 2
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
sly03013 Nucleocytoplasmic transport 3
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 8
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 6
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 6
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 5
bna03013 Nucleocytoplasmic transport 2
bna04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 5
bna03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 5
bna03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 7
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 9
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 11
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107832193 107769830 101252265 102587545 838115 100793629 100526905 103872338 103836025 100241131 7478120 7475720 11431644 121206106 107891682 106452315 106406808 106387562 102614962 4339341 100191510 123140460 123063429 123182659 123450046 8082990 100826227 5722149
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