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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123182659   periodic tryptophan protein 2 
 osa-u.5   4339341   periodic tryptophan protein 2 
 zma-u.5   100191510   periodic tryptophan protein 2 
 ath-u.5   PWP2   periodic tryptophan protein 2 
 gma-u.5   100793629   periodic tryptophan protein 2 
 gma-u.5   100526905   periodic tryptophan protein 2 
 sly-u.5   101252265   periodic tryptophan protein 2 
 vvi-u.5   100241131   periodic tryptophan protein 2 
 ppo-u.5   7478120   periodic tryptophan protein 2 
 ppo-u.5   7475720   periodic tryptophan protein 2 
 mtr-u.5   11431644   periodic tryptophan protein 2 

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Top 50 coexpressed genes to 123182659 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123182659 (tae-r.2 coexpression data)

CoexMap"123182659"


taeLOC123182659 | Entrez gene ID : 123182659    
Species tae osa zma ath gma sly vvi ppo mtr hvu cit bra ghi sbi bdi nta bna cre sot
Paralog 1 1 1 1 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes03008 [list] [network] Ribosome biogenesis in eukaryotes (6831 genes)
GO BP
GO:0000028 [list] [network] ribosomal small subunit assembly  (48 genes)  IEA  
GO:0000462 [list] [network] maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (91 genes)  IEA  
GO CC
GO:0034388 [list] [network] Pwp2p-containing subcomplex of 90S preribosome  (15 genes)  IEA  
GO:0032040 [list] [network] small-subunit processome  (161 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044451241.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 4,  cysk 1  (predict for XP_044451241.1)
Subcellular
localization
TargetP
mito 6,  other 5  (predict for XP_044451241.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123182659
osa-u.5
for
4339341
zma-u.5
for
100191510
ath-u.5
for
PWP2
gma-u.5
for
100793629
gma-u.5
for
100526905
sly-u.5
for
101252265
vvi-u.5
for
100241131
ppo-u.5
for
7478120
ppo-u.5
for
7475720
mtr-u.5
for
11431644


Ortholog ID: 8235
Species tae tae hvu bdi osa zma sbi ath gma gma sly bra bra vvi ppo ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC123182659 LOC123140460 LOC123450046 LOC100826227 LOC4339341 LOC100191510 LOC8082990 PWP2 LOC100793629 LOC100526905 LOC101252265 LOC103872338 LOC103836025 LOC100241131 LOC7475720 LOC7478120 LOC11431644 LOC121206106 LOC107891682 LOC106452315 LOC106387562 LOC102587545 LOC102614962 LOC107832193 LOC107769830 CHLRE_06g254150v5
Function* periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 homolog periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 homolog periodic tryptophan protein 2 periodic tryptophan protein 2 periodic tryptophan protein 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 11
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 9
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 7
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 8
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
sly03013 Nucleocytoplasmic transport 3
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 6
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 6
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 5
bna03013 Nucleocytoplasmic transport 2
bna04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 5
bna03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta03030 DNA replication 2
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta03030 DNA replication 2
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123182659 123140460 123450046 100826227 4339341 100191510 8082990 838115 100793629 100526905 101252265 103872338 103836025 100241131 7475720 7478120 11431644 121206106 107891682 106452315 106387562 102587545 102614962 107832193 107769830 5722149
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