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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107886958   NAD-dependent deacetylase sir2A 
 ghi-r.1   107908853   NAD-dependent deacetylase sir2A 
 ath-u.5   AT2G14825   histone deacetylase-like protein 
 bra-r.6   103847971   histone deacetylase 6 
 bna-r.1   106432953   histone deacetylase 6 
 bna-r.1   106409083   histone deacetylase 6 
 cit-r.1   102611806   uncharacterized LOC102611806 
 gma-u.5   100305878   uncharacterized LOC100305878 
 vvi-u.5   100246442   uncharacterized LOC100246442 
 ppo-u.5   7478730   uncharacterized LOC7478730 
 mtr-u.5   11439090   histone deacetylase 6 
 sly-u.5   101256924   uncharacterized LOC101256924 
 sot-r.1   102588265   histone deacetylase 6 
 nta-r.1   107771251   uncharacterized LOC107771251 
 nta-r.1   107803505   uncharacterized LOC107803505 
 osa-u.5   9268136   uncharacterized LOC9268136 
 zma-u.5   100273587   histone deacetylase 6 
 tae-r.2   123119897   histone deacetylase 6 
 tae-r.2   123110879   histone deacetylase 6 
 tae-r.2   123102739   histone deacetylase 6 
 hvu-r.1   123451755   histone deacetylase 6 
 sbi-r.1   8067194   histone deacetylase 6 
 bdi-r.1   100822662   histone deacetylase 6 

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Top 50 coexpressed genes to 107886958 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107886958 (ghi-r.1 coexpression data)

CoexMap"107886958"


ghiLOC107886958 | Entrez gene ID : 107886958    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 1 1 1 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (1753 genes)  IEA  
Protein XP_016666560.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto_nucl 5  (predict for XP_016666560.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016666560.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107886958
ghi-r.1
for
107908853
ath-u.5
for
AT2G14825
bra-r.6
for
103847971
bna-r.1
for
106432953
bna-r.1
for
106409083
cit-r.1
for
102611806
gma-u.5
for
100305878
vvi-u.5
for
100246442
ppo-u.5
for
7478730
mtr-u.5
for
11439090
sly-u.5
for
101256924
sot-r.1
for
102588265
nta-r.1
for
107771251
nta-r.1
for
107803505
osa-u.5
for
9268136
zma-u.5
for
100273587
tae-r.2
for
123119897
tae-r.2
for
123110879
tae-r.2
for
123102739
hvu-r.1
for
123451755
sbi-r.1
for
8067194
bdi-r.1
for
100822662


Ortholog ID: 11234
Species ghi ghi ath bra bna bna cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC107886958 LOC107908853 AT2G14825 LOC103847971 LOC106432953 LOC106409083 LOC102611806 LOC100305878 LOC100246442 LOC7478730 LOC11439090 LOC101256924 LOC102588265 LOC107771251 LOC107803505 LOC9268136 LOC100273587 LOC123119897 LOC123110879 LOC123102739 LOC123451755 LOC8067194 LOC100822662
Function* NAD-dependent deacetylase sir2A NAD-dependent deacetylase sir2A histone deacetylase-like protein histone deacetylase 6 histone deacetylase 6 histone deacetylase 6 uncharacterized LOC102611806 uncharacterized LOC100305878 uncharacterized LOC100246442 uncharacterized LOC7478730 histone deacetylase 6 uncharacterized LOC101256924 histone deacetylase 6 uncharacterized LOC107771251 uncharacterized LOC107803505 uncharacterized LOC9268136 histone deacetylase 6 histone deacetylase 6 histone deacetylase 6 histone deacetylase 6 histone deacetylase 6 histone deacetylase 6 histone deacetylase 6
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
ghi00940 Phenylpropanoid biosynthesis 2
ghi00941 Flavonoid biosynthesis 2
ghi00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04145 Phagosome 4
bna04148 Efferocytosis 4
bna04517 IgSF CAM signaling 4
bna04518 Integrin signaling 4
bna04620 Toll-like receptor signaling pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
cit03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 3
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 4
sly03083 Polycomb repressive complex 2
sly04141 Protein processing in endoplasmic reticulum 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 7
sot03040 Spliceosome 3
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta00071 Fatty acid degradation 2
nta00280 Valine, leucine and isoleucine degradation 2
nta00310 Lysine degradation 2
nta00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 5
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00564 Glycerophospholipid metabolism 2
sbi00190 Oxidative phosphorylation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107886958 107908853 815971 103847971 106432953 106409083 102611806 100305878 100246442 7478730 11439090 101256924 102588265 107771251 107803505 9268136 100273587 123119897 123110879 123102739 123451755 8067194 100822662
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