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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11439090   histone deacetylase 6 
 mtr-r.5   11439090   histone deacetylase 6 
 mtr-m.5   11439090   histone deacetylase 6 
 gma-u.5   100305878   uncharacterized LOC100305878 
 ppo-u.5   7478730   uncharacterized LOC7478730 
 ath-u.5   AT2G14825   histone deacetylase-like protein 
 vvi-u.5   100246442   uncharacterized LOC100246442 
 sly-u.5   101256924   uncharacterized LOC101256924 
 osa-u.5   9268136   uncharacterized LOC9268136 
 zma-u.5   100273587   histone deacetylase 6 

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Top 50 coexpressed genes to 11439090 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11439090 (mtr-u.5 coexpression data)

CoexMap"11439090"


mtrLOC11439090 | Entrez gene ID : 11439090      
Species mtr gma ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (919 genes)  IEA  
Protein XP_003610624.1 [sequence] [blastp]
XP_024639326.1 [sequence] [blastp]
XP_024639327.1 [sequence] [blastp]
XP_039690059.1 [sequence] [blastp]
XP_039690060.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  nucl 2,  cyto 2,  extr 2,  cyto_nucl 2  (predict for XP_003610624.1)
chlo 3,  nucl 2,  cyto 2,  extr 2,  cyto_nucl 2  (predict for XP_024639326.1)
chlo 3,  nucl 2,  cyto 2,  extr 2,  cyto_nucl 2  (predict for XP_024639327.1)
chlo 3,  nucl 2,  cyto 2,  extr 2,  cyto_nucl 2  (predict for XP_039690059.1)
chlo 3,  nucl 2,  cyto 2,  extr 2,  cyto_nucl 2  (predict for XP_039690060.1)
Subcellular
localization
TargetP
other 8  (predict for XP_003610624.1)
other 8  (predict for XP_024639326.1)
other 8  (predict for XP_024639327.1)
other 8  (predict for XP_039690059.1)
other 8  (predict for XP_039690060.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11439090
mtr-r.5
for
11439090
mtr-m.5
for
11439090
gma-u.5
for
100305878
ppo-u.5
for
7478730
ath-u.5
for
AT2G14825
vvi-u.5
for
100246442
sly-u.5
for
101256924
osa-u.5
for
9268136
zma-u.5
for
100273587


Ortholog ID: 11234
Species mtr gma ppo ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC11439090 LOC100305878 LOC7478730 AT2G14825 LOC103847971 LOC100246442 LOC107886958 LOC107908853 LOC106409083 LOC106432953 LOC102611806 LOC101256924 LOC102588265 LOC107803505 LOC107771251 LOC9268136 LOC100273587 LOC123102739 LOC123119897 LOC123451755 LOC8067194 LOC100822662
Function* histone deacetylase 6 uncharacterized LOC100305878 uncharacterized LOC7478730 histone deacetylase-like protein histone deacetylase 6 uncharacterized LOC100246442 NAD-dependent deacetylase sir2A NAD-dependent deacetylase sir2A histone deacetylase 6 histone deacetylase 6 uncharacterized LOC102611806 uncharacterized LOC101256924 histone deacetylase 6 uncharacterized LOC107803505 uncharacterized LOC107771251 uncharacterized LOC9268136 histone deacetylase 6 histone deacetylase 6 histone deacetylase 6 histone deacetylase 6 histone deacetylase 6 histone deacetylase 6
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 3
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
ghi00940 Phenylpropanoid biosynthesis 2
ghi00941 Flavonoid biosynthesis 2
ghi00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04145 Phagosome 4
bna04148 Efferocytosis 4
bna04517 IgSF CAM signaling 4
bna04518 Integrin signaling 4
bna04620 Toll-like receptor signaling pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
cit03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 4
sly03083 Polycomb repressive complex 2
sly04141 Protein processing in endoplasmic reticulum 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 7
sot03040 Spliceosome 3
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta00071 Fatty acid degradation 2
nta00280 Valine, leucine and isoleucine degradation 2
nta00310 Lysine degradation 2
nta00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00564 Glycerophospholipid metabolism 2
sbi00190 Oxidative phosphorylation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11439090 100305878 7478730 815971 103847971 100246442 107886958 107908853 106409083 106432953 102611806 101256924 102588265 107803505 107771251 9268136 100273587 123102739 123119897 123451755 8067194 100822662
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