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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107887278   lysine-specific histone demethylase 1 homolog 3 
 ghi-r.1   107959789   lysine-specific histone demethylase 1 homolog 3 
 ghi-r.1   107934347   lysine-specific histone demethylase 1 homolog 3 
 ghi-r.1   107910719   lysine-specific histone demethylase 1 homolog 3 
 ath-u.5   LDL3   LSD1-like 3 
 bra-r.6   103849514   lysine-specific histone demethylase 1 homolog 3 
 bna-r.1   106415213   lysine-specific histone demethylase 1 homolog 3 
 bna-r.1   106360660   lysine-specific histone demethylase 1 homolog 3 
 cit-r.1   102614145   lysine-specific histone demethylase 1 homolog 3 
 gma-u.5   100791869   lysine-specific histone demethylase 1 homolog 3 
 gma-u.5   100779479   lysine-specific histone demethylase 1 homolog 3 
 vvi-u.5   100255769   lysine-specific histone demethylase 1 homolog 3 
 ppo-u.5   7493945   lysine-specific histone demethylase 1 homolog 3 
 ppo-u.5   7479699   lysine-specific histone demethylase 1 homolog 3 
 mtr-u.5   11426826   lysine-specific histone demethylase 1 homolog 3 
 mtr-u.5   11416384   lysine-specific histone demethylase 1 homolog 3 
 sly-u.5   101247522   lysine-specific histone demethylase 1 homolog 3 
 sot-r.1   102586217   lysine-specific histone demethylase 1 homolog 3 
 nta-r.1   107795945   lysine-specific histone demethylase 1 homolog 3 
 osa-u.5   4349214   lysine-specific histone demethylase 1 homolog 3 
 zma-u.5   103637393   lysine-specific histone demethylase 1 homolog 3 
 tae-r.2   123146258   lysine-specific histone demethylase 1 homolog 3 
 tae-r.2   123139984   lysine-specific histone demethylase 1 homolog 3 
 tae-r.2   123129088   lysine-specific histone demethylase 1 homolog 3 
 hvu-r.1   123402801   lysine-specific histone demethylase 1 homolog 3 
 sbi-r.1   8062879   lysine-specific histone demethylase 1 homolog 3 
 bdi-r.1   100845102   lysine-specific histone demethylase 1 homolog 3 

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Top 50 coexpressed genes to 107887278 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107887278 (ghi-r.1 coexpression data)

CoexMap"107887278"


ghiLOC107887278 | Entrez gene ID : 107887278    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 1 2 1 2 1 2 2 1 1 1 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0016491 [list] [network] oxidoreductase activity  (3258 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_040953499.1 [sequence] [blastp]
XP_040953500.1 [sequence] [blastp]
XP_040953503.1 [sequence] [blastp]
XP_040953507.1 [sequence] [blastp]
XP_040953510.1 [sequence] [blastp]
XP_040953512.1 [sequence] [blastp]
XP_040953514.1 [sequence] [blastp]
XP_040953516.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 1,  plas 1,  E.R. 1,  pero 1,  golg 1,  golg_plas 1,  cyto_pero 1,  E.R._plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_040953499.1)
nucl 6,  cyto 1,  plas 1,  E.R. 1,  pero 1,  golg 1,  golg_plas 1,  cyto_pero 1,  E.R._plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_040953500.1)
nucl 6,  cyto 1,  plas 1,  E.R. 1,  pero 1,  golg 1,  golg_plas 1,  cyto_pero 1,  E.R._plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_040953503.1)
nucl 6,  cyto 1,  plas 1,  E.R. 1,  pero 1,  golg 1,  golg_plas 1,  cyto_pero 1,  E.R._plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_040953507.1)
nucl 6,  cyto 1,  plas 1,  E.R. 1,  pero 1,  golg 1,  golg_plas 1,  cyto_pero 1,  E.R._plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_040953510.1)
nucl 6,  cyto 1,  plas 1,  E.R. 1,  pero 1,  golg 1,  golg_plas 1,  cyto_pero 1,  E.R._plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_040953512.1)
nucl 6,  cyto 1,  plas 1,  E.R. 1,  pero 1,  golg 1,  golg_plas 1,  cyto_pero 1,  E.R._plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_040953514.1)
nucl 6,  cyto 1,  plas 1,  E.R. 1,  pero 1,  golg 1,  golg_plas 1,  cyto_pero 1,  E.R._plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_040953516.1)
Subcellular
localization
TargetP
other 9  (predict for XP_040953499.1)
other 9  (predict for XP_040953500.1)
other 9  (predict for XP_040953503.1)
other 9  (predict for XP_040953507.1)
other 9  (predict for XP_040953510.1)
other 9  (predict for XP_040953512.1)
other 9  (predict for XP_040953514.1)
other 9  (predict for XP_040953516.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107887278
ghi-r.1
for
107959789
ghi-r.1
for
107934347
ghi-r.1
for
107910719
ath-u.5
for
LDL3
bra-r.6
for
103849514
bna-r.1
for
106415213
bna-r.1
for
106360660
cit-r.1
for
102614145
gma-u.5
for
100791869
gma-u.5
for
100779479
vvi-u.5
for
100255769
ppo-u.5
for
7493945
ppo-u.5
for
7479699
mtr-u.5
for
11426826
mtr-u.5
for
11416384
sly-u.5
for
101247522
sot-r.1
for
102586217
nta-r.1
for
107795945
osa-u.5
for
4349214
zma-u.5
for
103637393
tae-r.2
for
123146258
tae-r.2
for
123139984
tae-r.2
for
123129088
hvu-r.1
for
123402801
sbi-r.1
for
8062879
bdi-r.1
for
100845102


Ortholog ID: 9017
Species ghi ghi ghi ath bra bna bna cit gma gma vvi ppo ppo mtr mtr sly sot nta osa zma tae tae tae hvu sbi bdi
Symbol LOC107887278 LOC107934347 LOC107910719 LDL3 LOC103849514 LOC106415213 LOC106360660 LOC102614145 LOC100791869 LOC100779479 LOC100255769 LOC7493945 LOC7479699 LOC11426826 LOC11416384 LOC101247522 LOC102586217 LOC107795945 LOC4349214 LOC103637393 LOC123146258 LOC123139984 LOC123129088 LOC123402801 LOC8062879 LOC100845102
Function* lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 LSD1-like 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 3
ghi04070 Phosphatidylinositol signaling system 3
ghi04145 Phagosome 3
ghi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
ghi04145 Phagosome 2
ghi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03083 Polycomb repressive complex 2
ath03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma03040 Spliceosome 2
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 5
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
mtr04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00310 Lysine degradation 2
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
nta04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
bdi03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107887278 107934347 107910719 827325 103849514 106415213 106360660 102614145 100791869 100779479 100255769 7493945 7479699 11426826 11416384 101247522 102586217 107795945 4349214 103637393 123146258 123139984 123129088 123402801 8062879 100845102
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