ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107890776	importin subunit beta-1
ghi-r.1	107947228	importin subunit beta-1
ghi-r.1	107944769	importin subunit beta-1
ghi-r.1	107930251	importin subunit beta-1
ath-u.5	AT5G53480	ARM repeat superfamily protein
ath-u.5	AT3G08943	ARM repeat superfamily protein
ath-u.5	AT3G08947	ARM repeat superfamily protein
bra-r.6	103844822	importin subunit beta-1
bra-r.6	103870576	importin subunit beta-1
bna-r.1	106417864	importin subunit beta-1
bna-r.1	106371293	importin subunit beta-1
bna-r.1	106399821	importin subunit beta-1
cit-r.1	102623348	importin subunit beta-1-like
cit-r.1	102621963	importin subunit beta-1
cit-r.1	102611445	importin subunit beta-1
gma-u.5	100785130	importin subunit beta-1
gma-u.5	100802578	importin subunit beta-1
gma-u.5	100818831	importin subunit beta-1
vvi-u.5	100241948	importin subunit beta-1
vvi-u.5	100265913	importin subunit beta-1
ppo-u.5	7460392	importin subunit beta-1
ppo-u.5	7464283	importin subunit beta-1
ppo-u.5	7468068	importin subunit beta-1
mtr-u.5	25491131	importin subunit beta-1
mtr-u.5	25491133	importin subunit beta-1
mtr-u.5	25502229	importin subunit beta-1
sly-u.5	101263498	importin subunit beta-1
sly-u.5	112941689	importin subunit beta-1-like
sly-u.5	101258299	importin subunit beta-1
sot-r.1	102595228	importin subunit beta-1
sot-r.1	102599745	importin subunit beta-1
sot-r.1	102584682	importin subunit beta-1-like
nta-r.1	107805657	importin subunit beta-1-like
nta-r.1	107817967	importin subunit beta-1
nta-r.1	107808696	importin subunit beta-1
osa-u.5	4352566	importin subunit beta-1
osa-u.5	4332526	importin subunit beta-1
osa-u.5	4338508	importin subunit beta-1
zma-u.5	103630277	importin subunit beta-1
zma-u.5	103635758	importin subunit beta-1
zma-u.5	100381984	uncharacterized LOC100381984
tae-r.2	123102467	importin subunit beta-1
tae-r.2	123097762	importin subunit beta-1
tae-r.2	123085590	importin subunit beta-1
hvu-r.1	123441193	importin subunit beta-1-like
hvu-r.1	123397978	importin subunit beta-1-like
hvu-r.1	123399246	importin subunit beta-1-like
sbi-r.1	8061328	importin subunit beta-1
sbi-r.1	8068094	importin subunit beta-1
sbi-r.1	8074036	importin subunit beta-1
bdi-r.1	100827513	importin subunit beta-1
bdi-r.1	100845669	importin subunit beta-1
bdi-r.1	100829120	importin subunit beta-1
cre-r.1	CHLRE_01g034000v5	uncharacterized protein

Top 50 coexpressed genes to 107890776 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107890776 (ghi-r.1 coexpression data)

CoexMap"107890776"

[Cytoscape]

Annotation

functional annotation

KEGG

ghi03013 [list] [network] Nucleocytoplasmic transport (289 genes)

GO BP

GO:0006606 [list] [network] protein import into nucleus

(140 genes)

IEA

GO CC

GO:0005634 [list] [network] nucleus	(7681 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(13864 genes)	IEA

GO MF

GO:0061608 [list] [network] nuclear import signal receptor activity	(68 genes)	IEA
GO:0008139 [list] [network] nuclear localization sequence binding	(73 genes)	IEA
GO:0031267 [list] [network] small GTPase binding	(80 genes)	IEA

Protein

XP_016670799.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 5, cyto 4, nucl 1, vacu 1

(predict for XP_016670799.2)

Subcellular
localization
TargetP

other 8

(predict for XP_016670799.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107890776	ghi-r.1 for 107947228	ghi-r.1 for 107944769	ghi-r.1 for 107930251	ath-u.5 for AT5G53480	ath-u.5 for AT3G08943	ath-u.5 for AT3G08947	bra-r.6 for 103844822	bra-r.6 for 103870576	bna-r.1 for 106417864	bna-r.1 for 106371293	bna-r.1 for 106399821	cit-r.1 for 102623348	cit-r.1 for 102621963	cit-r.1 for 102611445	gma-u.5 for 100785130	gma-u.5 for 100802578	gma-u.5 for 100818831	vvi-u.5 for 100241948	vvi-u.5 for 100265913	ppo-u.5 for 7460392	ppo-u.5 for 7464283	ppo-u.5 for 7468068	mtr-u.5 for 25491131	mtr-u.5 for 25491133	mtr-u.5 for 25502229	sly-u.5 for 101263498	sly-u.5 for 112941689	sly-u.5 for 101258299	sot-r.1 for 102595228	sot-r.1 for 102599745	sot-r.1 for 102584682	nta-r.1 for 107805657	nta-r.1 for 107817967	nta-r.1 for 107808696	osa-u.5 for 4352566	osa-u.5 for 4332526	osa-u.5 for 4338508	zma-u.5 for 103630277	zma-u.5 for 103635758	zma-u.5 for 100381984	tae-r.2 for 123102467	tae-r.2 for 123097762	tae-r.2 for 123085590	hvu-r.1 for 123441193	hvu-r.1 for 123397978	hvu-r.1 for 123399246	sbi-r.1 for 8061328	sbi-r.1 for 8068094	sbi-r.1 for 8074036	bdi-r.1 for 100827513	bdi-r.1 for 100845669	bdi-r.1 for 100829120	cre-r.1 for CHLRE_01g034000v5

Ortholog

Ortholog ID: 1325

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

importin subunit beta-1

ARM repeat superfamily protein

importin subunit beta-1

importin subunit beta-1-like

importin subunit beta-1

importin subunit beta-1-like

importin subunit beta-1

importin subunit beta-1-like

importin subunit beta-1

importin subunit beta-1-like

importin subunit beta-1

uncharacterized LOC100381984

uncharacterized LOC100383778

importin subunit beta-1

importin subunit beta-1-like

importin subunit beta-1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03013	Nucleocytoplasmic transport	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03013	Nucleocytoplasmic transport	8
ghi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03013	Nucleocytoplasmic transport	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	3
ath03013	Nucleocytoplasmic transport	3
ath04016	MAPK signaling pathway - plant	2
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03013	Nucleocytoplasmic transport	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03013	Nucleocytoplasmic transport	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04144	Endocytosis	4
bra04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03013	Nucleocytoplasmic transport	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03020	RNA polymerase	5
bna03420	Nucleotide excision repair	5
bna00020	Citrate cycle (TCA cycle)	2
bna00785	Lipoic acid metabolism	2
bna01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03013	Nucleocytoplasmic transport	4
bna03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	6
bna03013	Nucleocytoplasmic transport	4
bna03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03013	Nucleocytoplasmic transport	4
cit01200	Carbon metabolism	3
cit00020	Citrate cycle (TCA cycle)	2
cit00785	Lipoic acid metabolism	2
cit01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03013	Nucleocytoplasmic transport	5
cit03010	Ribosome	3
cit00290	Valine, leucine and isoleucine biosynthesis	2
cit00770	Pantothenate and CoA biosynthesis	2
cit01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	3
cit03013	Nucleocytoplasmic transport	2
cit04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03013	Nucleocytoplasmic transport	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03013	Nucleocytoplasmic transport	4
gma03010	Ribosome	2
gma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03013	Nucleocytoplasmic transport	7
gma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03013	Nucleocytoplasmic transport	4
vvi00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04142	Lysosome	3
vvi03013	Nucleocytoplasmic transport	2
vvi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	5
ppo03013	Nucleocytoplasmic transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04144	Endocytosis	3
ppo03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03030	DNA replication	8
ppo03410	Base excision repair	2
ppo03420	Nucleotide excision repair	2
ppo03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	3
mtr03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04144	Endocytosis	3
mtr03250	Viral life cycle - HIV-1	2
mtr03272	Virion - Hepatitis viruses	2
mtr03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03013	Nucleocytoplasmic transport	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04016	MAPK signaling pathway - plant	4
sly04075	Plant hormone signal transduction	4
sly03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03013	Nucleocytoplasmic transport	6
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03013	Nucleocytoplasmic transport	4
sot04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03013	Nucleocytoplasmic transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03013	Nucleocytoplasmic transport	5
sot00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03013	Nucleocytoplasmic transport	5
nta04141	Protein processing in endoplasmic reticulum	2
nta03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04814	Motor proteins	4
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03013	Nucleocytoplasmic transport	5
nta03018	RNA degradation	4
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	3
osa03013	Nucleocytoplasmic transport	2
osa03060	Protein export	2
osa04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03013	Nucleocytoplasmic transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03008	Ribosome biogenesis in eukaryotes	3
osa03010	Ribosome	2
osa03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03013	Nucleocytoplasmic transport	5
zma03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03013	Nucleocytoplasmic transport	7
zma04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03013	Nucleocytoplasmic transport	3
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	7
tae04148	Efferocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	6
tae03040	Spliceosome	4
tae04120	Ubiquitin mediated proteolysis	3
tae03030	DNA replication	2
tae03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03013	Nucleocytoplasmic transport	5
hvu01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03013	Nucleocytoplasmic transport	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03018	RNA degradation	2
sbi01240	Biosynthesis of cofactors	2
sbi03013	Nucleocytoplasmic transport	2
sbi00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03013	Nucleocytoplasmic transport	6
sbi00230	Purine metabolism	2
sbi01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03013	Nucleocytoplasmic transport	4
bdi04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03013	Nucleocytoplasmic transport	2
bdi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03008	Ribosome biogenesis in eukaryotes	8
bdi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03013	Nucleocytoplasmic transport	3

Expression

Expression pattern

Entrez Gene ID^*

107890776

107944769

107890775

835429

3768764

3768765

103844822

103870576

106417864

106399821

111215807

102623348

102621963

102611445

100802578

100818831

100805445

100241948

100265913

7460392

7464283

7468068

25491131

25491133

25502229

101263498

112941689

101258299

102595228

102599745

102584682

107813226

107816465

107794538

4352566

4332526

4338508

103635758

100381984

100383778

123102467

123085590

123110698

123441193

123408642

123448895

8061328

8068094

8074036

100827513

100845669

100829120

5715432

The preparation time of this page was 0.2 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	2	3	3	3	2	3	3	3	3	3	3	3	3	3	3	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107890776 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107890776 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**