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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107894037   nucleolin 1 
 ghi-r.1   107946108   nucleolin 2 
 ghi-r.1   107928939   nucleolin 1 
 ghi-r.1   107920425   nucleolin 1 
 ath-u.5   NUC-L2   nucleolin like 2 
 ath-u.5   NUC-L1   nucleolin like 1 
 bra-r.6   103869544   nucleolin 2 
 bra-r.6   103868665   nucleolin 1 
 bra-r.6   103833240   nucleolin 1 
 bna-r.1   106412081   nucleolin 2 
 bna-r.1   106382078   nucleolin 1 
 bna-r.1   125575007   nucleolin 1-like 
 cit-r.1   102610503   nucleolin 2 
 gma-u.5   100779929   nucleolin 1 
 gma-u.5   100786132   nucleolin 1 
 vvi-u.5   104879270   nucleolin 2-like 
 ppo-u.5   7486382   nucleolin 1 
 ppo-u.5   18101017   nucleolin 2 
 mtr-u.5   11446619   nucleolin 1 
 sly-u.5   544064   nucleolin-like 
 sot-r.1   102599812   nucleolin 1 
 nta-r.1   107762714   nucleolin 1-like 
 nta-r.1   107776783   uncharacterized LOC107776783 
 osa-u.5   4344865   nucleolin 1-like 
 osa-u.5   4337032   nucleolin 2-like 
 zma-u.5   100194303   uncharacterized LOC100194303 
 tae-r.2   123054607   nucleolin 2 
 tae-r.2   123120521   nucleolin 2 
 tae-r.2   123046749   nucleolin 2 
 hvu-r.1   123427797   nucleolin 2-like 
 hvu-r.1   123411480   nucleolin 1 
 sbi-r.1   8085015   nucleolin 2 
 sbi-r.1   8067716   nucleolin 2 
 bdi-r.1   100836665   nucleolin 1 
 bdi-r.1   100838448   nucleolin 2 
 cre-r.1   CHLRE_06g275100v5   uncharacterized protein 

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Top 50 coexpressed genes to 107894037 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107894037 (ghi-r.1 coexpression data)

CoexMap"107894037"


ghiLOC107894037 | Entrez gene ID : 107894037    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 3 1 2 1 2 1 1 1 2 2 1 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005730 [list] [network] nucleolus  (469 genes)  IEA  
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (13864 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (890 genes)  IEA  
Protein XP_016674719.2 [sequence] [blastp]
XP_016674720.2 [sequence] [blastp]
XP_016674721.2 [sequence] [blastp]
XP_016674722.2 [sequence] [blastp]
XP_016674723.2 [sequence] [blastp]
XP_040940862.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_016674719.2)
nucl 10  (predict for XP_016674720.2)
nucl 10  (predict for XP_016674721.2)
nucl 10  (predict for XP_016674722.2)
nucl 10  (predict for XP_016674723.2)
nucl 10  (predict for XP_040940862.1)
Subcellular
localization
TargetP
other 6,  chlo 4  (predict for XP_016674719.2)
other 6,  chlo 4  (predict for XP_016674720.2)
other 6,  chlo 4  (predict for XP_016674721.2)
other 6,  chlo 4  (predict for XP_016674722.2)
other 6,  chlo 4  (predict for XP_016674723.2)
other 6,  chlo 4  (predict for XP_040940862.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107894037
ghi-r.1
for
107946108
ghi-r.1
for
107928939
ghi-r.1
for
107920425
ath-u.5
for
NUC-L2
ath-u.5
for
NUC-L1
bra-r.6
for
103869544
bra-r.6
for
103868665
bra-r.6
for
103833240
bna-r.1
for
106412081
bna-r.1
for
106382078
bna-r.1
for
125575007
cit-r.1
for
102610503
gma-u.5
for
100779929
gma-u.5
for
100786132
vvi-u.5
for
104879270
ppo-u.5
for
7486382
ppo-u.5
for
18101017
mtr-u.5
for
11446619
sly-u.5
for
544064
sot-r.1
for
102599812
nta-r.1
for
107762714
nta-r.1
for
107776783
osa-u.5
for
4344865
osa-u.5
for
4337032
zma-u.5
for
100194303
tae-r.2
for
123054607
tae-r.2
for
123120521
tae-r.2
for
123046749
hvu-r.1
for
123427797
hvu-r.1
for
123411480
sbi-r.1
for
8085015
sbi-r.1
for
8067716
bdi-r.1
for
100836665
bdi-r.1
for
100838448
cre-r.1
for
CHLRE_06g275100v5


Ortholog ID: 3223
Species ghi ghi ghi ath ath bra bra bra bna bna bna cit gma gma vvi ppo ppo mtr sly sot nta nta osa osa zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC107894037 LOC107920425 LOC107900963 NUC-L2 NUC-L1 LOC103869544 LOC103833240 LOC103871689 LOC106412081 LOC125596200 LOC111202893 LOC102610503 LOC100779929 LOC100786132 LOC100262769 LOC7486382 LOC18101017 LOC11446619 LOC544064 LOC102599812 LOC107762714 LOC107776783 LOC4344865 LOC4337032 LOC100194303 LOC123054607 LOC123120521 LOC123046749 LOC123427797 LOC123411480 LOC8085015 LOC8067716 LOC100836665 LOC100838448 CHLRE_06g275100v5
Function* nucleolin 1 nucleolin 1 nucleolin 1 nucleolin like 2 nucleolin like 1 nucleolin 2 nucleolin 1 nucleolin 1 nucleolin 2 nucleolin 1-like nucleolin 1 nucleolin 2 nucleolin 1 nucleolin 1 nucleolin 2 nucleolin 1 nucleolin 2 nucleolin 1 nucleolin-like nucleolin 1 nucleolin 1-like uncharacterized LOC107776783 nucleolin 1-like nucleolin 2-like uncharacterized LOC100194303 nucleolin 2 nucleolin 2 nucleolin 2 nucleolin 2-like nucleolin 1 nucleolin 2 nucleolin 2 nucleolin 1 nucleolin 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 3
ath03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 10
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 8
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 9
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
nta03008 Ribosome biogenesis in eukaryotes 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 6
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 3
tae04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 5
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 6
hvu03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
sbi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107894037 107920425 107900963 821392 841314 103869544 103833240 103871689 106412081 125596200 111202893 102610503 100779929 100786132 100262769 7486382 18101017 11446619 544064 102599812 107762714 107776783 4344865 4337032 100194303 123054607 123120521 123046749 123427797 123411480 8085015 8067716 100836665 100838448 66053667
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