ATTED-II : GeneCoexpression result

Species	Gene	Description
cre-r.1	CHLRE_06g275100v5	uncharacterized protein
ath-u.5	NUC-L2	nucleolin like 2
ath-u.5	NUC-L1	nucleolin like 1
gma-u.5	100779929	nucleolin 1
gma-u.5	100786132	nucleolin 1
sly-u.5	544064	nucleolin-like
osa-u.5	4344865	nucleolin 1-like
osa-u.5	4337032	nucleolin 2-like
zma-u.5	100194303	uncharacterized LOC100194303
bra-r.6	103871689	nucleolin 1
bra-r.6	103869544	nucleolin 2
bra-r.6	103868665	nucleolin 1
vvi-u.5	104879270	nucleolin 2-like
ppo-u.5	7486382	nucleolin 1
ppo-u.5	18101017	nucleolin 2
mtr-u.5	11446619	nucleolin 1
tae-r.2	123154406	nucleolin 1
tae-r.2	123120521	nucleolin 2
tae-r.2	123156145	nucleolin 1
hvu-r.1	123427797	nucleolin 2-like
hvu-r.1	123411480	nucleolin 1
ghi-r.1	107900963	nucleolin 1
ghi-r.1	107946108	nucleolin 2
ghi-r.1	107894037	nucleolin 1
bna-r.1	106381055	nucleolin 1-like
bna-r.1	106423765	nucleolin 1-like
bna-r.1	125575007	nucleolin 1-like
sbi-r.1	8067716	nucleolin 2
sbi-r.1	8085015	nucleolin 2
sot-r.1	102599812	nucleolin 1
cit-r.1	102610503	nucleolin 2
bdi-r.1	100838448	nucleolin 2
bdi-r.1	100836665	nucleolin 1
nta-r.1	107776783	uncharacterized LOC107776783
nta-r.1	107762714	nucleolin 1-like

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0003723 [list] [network] RNA binding

(670 genes)

IEA

Protein

XP_042923705.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10

(predict for XP_042923705.1)

Subcellular
localization
TargetP

other 8

(predict for XP_042923705.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_06g275100v5	ath-u.5 for NUC-L2	ath-u.5 for NUC-L1	gma-u.5 for 100779929	gma-u.5 for 100786132	sly-u.5 for 544064	osa-u.5 for 4344865	osa-u.5 for 4337032	zma-u.5 for 100194303	bra-r.6 for 103871689	bra-r.6 for 103869544	bra-r.6 for 103868665	vvi-u.5 for 104879270	ppo-u.5 for 7486382	ppo-u.5 for 18101017	mtr-u.5 for 11446619	tae-r.2 for 123154406	tae-r.2 for 123120521	tae-r.2 for 123156145	hvu-r.1 for 123427797	hvu-r.1 for 123411480	ghi-r.1 for 107900963	ghi-r.1 for 107946108	ghi-r.1 for 107894037	bna-r.1 for 106381055	bna-r.1 for 106423765	bna-r.1 for 125575007	sbi-r.1 for 8067716	sbi-r.1 for 8085015	sot-r.1 for 102599812	cit-r.1 for 102610503	bdi-r.1 for 100838448	bdi-r.1 for 100836665	nta-r.1 for 107776783	nta-r.1 for 107762714

Ortholog

Ortholog ID: 3223

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

CHLRE_06g275100v5

NUC-L2

NUC-L1

Function^*

uncharacterized protein

nucleolin like 2

nucleolin like 1

nucleolin 1

nucleolin-like

nucleolin 1-like

nucleolin 2-like

uncharacterized LOC100194303

nucleolin 1

nucleolin 2

nucleolin 1

nucleolin 2

nucleolin 1

nucleolin 2

nucleolin 1

nucleolin 2

nucleolin 2-like

nucleolin 1

nucleolin 1-like

nucleolin 2

nucleolin 1

nucleolin 2

nucleolin 1

nucleolin 2

nucleolin 1

uncharacterized LOC107776783

nucleolin 1-like

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	3
ath03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03008	Ribosome biogenesis in eukaryotes	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	10
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	8
gma00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03008	Ribosome biogenesis in eukaryotes	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03008	Ribosome biogenesis in eukaryotes	6
zma00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	9
ppo03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00940	Phenylpropanoid biosynthesis	3
tae04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00970	Aminoacyl-tRNA biosynthesis	3
tae03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03008	Ribosome biogenesis in eukaryotes	5
hvu00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03008	Ribosome biogenesis in eukaryotes	6
hvu03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	4
ghi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03008	Ribosome biogenesis in eukaryotes	4
sbi00970	Aminoacyl-tRNA biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03008	Ribosome biogenesis in eukaryotes	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03008	Ribosome biogenesis in eukaryotes	2
bdi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03008	Ribosome biogenesis in eukaryotes	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03082	ATP-dependent chromatin remodeling	2
nta03008	Ribosome biogenesis in eukaryotes	2
nta03013	Nucleocytoplasmic transport	2

Expression

Expression pattern

Entrez Gene ID^*

66053667

821392

841314

100779929

100786132

544064

4344865

4337032

100194303

103871689

103869544

103833240

100262769

7486382

18101017

11446619

123120521

123046749

123054607

123427797

123411480

107900963

107894037

107920425

125596200

106412081

111202893

8067716

8085015

102599812

102610503

100838448

100836665

107776783

107762714

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to CHLRE_06g275100v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_06g275100v5 (cre-r.1 coexpression data)


Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	1	2	2	1	2	1	3	1	2	1	3	2	3	3	2	1	1	2	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_06g275100v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_06g275100v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**