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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7486382   nucleolin 1 
 ppo-r.4   7486382   nucleolin 1 
 ppo-u.5   18101017   nucleolin 2 
 gma-u.5   100779929   nucleolin 1 
 gma-u.5   100786132   nucleolin 1 
 mtr-u.5   11446619   nucleolin 1 
 ath-u.5   NUC-L2   nucleolin like 2 
 ath-u.5   NUC-L1   nucleolin like 1 
 vvi-u.5   100262769   nucleolin 2 
 vvi-u.5   104879270   nucleolin 2-like 
 sly-u.5   544064   nucleolin-like 
 osa-u.5   4337032   nucleolin 2-like 
 osa-u.5   4344865   nucleolin 1-like 
 zma-u.5   100194303   uncharacterized LOC100194303 

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Top 50 coexpressed genes to 7486382 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7486382 (ppo-u.5 coexpression data)

CoexMap"7486382"


ppoLOC7486382 | Entrez gene ID : 7486382    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 1 2 2 1 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
Protein XP_002307174.1 [sequence] [blastp]
XP_024457486.1 [sequence] [blastp]
XP_024457488.1 [sequence] [blastp]
XP_024457489.1 [sequence] [blastp]
XP_052308995.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_002307174.1)
nucl 9  (predict for XP_024457486.1)
nucl 9  (predict for XP_024457488.1)
nucl 9  (predict for XP_024457489.1)
nucl 9  (predict for XP_052308995.1)
Subcellular
localization
TargetP
other 7  (predict for XP_002307174.1)
other 7  (predict for XP_024457486.1)
other 7  (predict for XP_024457488.1)
other 7  (predict for XP_024457489.1)
other 7  (predict for XP_052308995.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7486382

.
ppo-r.4
for
7486382

.
ppo-u.5
for
18101017

.
gma-u.5
for
100779929

.
gma-u.5
for
100786132

.
mtr-u.5
for
11446619

.
ath-u.5
for
NUC-L2

.
ath-u.5
for
NUC-L1

.
vvi-u.5
for
100262769

.
vvi-u.5
for
104879270

.
sly-u.5
for
544064

.
osa-u.5
for
4337032

.
osa-u.5
for
4344865

.
zma-u.5
for
100194303

.


Ortholog ID: 3223
Species ath ath gma gma sly osa osa zma bra bra ppo ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot cit bdi bdi nta nta
Symbol NUC-L1 NUC-L2 LOC100779929 LOC100786132 LOC544064 LOC4344865 LOC4337032 LOC100194303 LOC103869544 LOC103833240 LOC18101017 LOC7486382 LOC11446619 LOC123054607 LOC123046749 LOC123411480 LOC123427797 LOC107894037 LOC107900963 LOC125596200 LOC106412081 CHLRE_06g275100v5 LOC8085015 LOC8067716 LOC102599812 LOC102610503 LOC100838448 LOC100836665 LOC107776783 LOC107762714
Function* nucleolin like 1 nucleolin like 2 nucleolin 1 nucleolin 1 nucleolin-like nucleolin 1-like nucleolin 2-like uncharacterized LOC100194303 nucleolin 2 nucleolin 1 nucleolin 2 nucleolin 1 nucleolin 1 nucleolin 2 nucleolin 2 nucleolin 1 nucleolin 2-like nucleolin 1 nucleolin 1 nucleolin 1-like nucleolin 2 uncharacterized protein nucleolin 2 nucleolin 2 nucleolin 1 nucleolin 2 nucleolin 2 nucleolin 1 uncharacterized LOC107776783 nucleolin 1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 3
ath03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 10
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 8
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 6
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 9
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 3
tae04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 6
hvu03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 5
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
sbi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
nta03008 Ribosome biogenesis in eukaryotes 2
nta03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841314 821392 100779929 100786132 544064 4344865 4337032 100194303 103869544 103833240 18101017 7486382 11446619 123054607 123046749 123411480 123427797 107894037 107900963 125596200 106412081 66053667 8085015 8067716 102599812 102610503 100838448 100836665 107776783 107762714
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