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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100262769   nucleolin 2 
 vvi-r.5   100262769   nucleolin 2 
 vvi-m.5   100262769   nucleolin 2 
 vvi-u.5   104879270   nucleolin 2-like 
 ath-u.5   NUC-L2   nucleolin like 2 
 ath-u.5   NUC-L1   nucleolin like 1 
 gma-u.5   100779929   nucleolin 1 
 gma-u.5   100786132   nucleolin 1 
 bra-r.6   103869544   nucleolin 2 
 bra-r.6   103871689   nucleolin 1 
 bra-r.6   103868665   nucleolin 1 
 ppo-u.5   7486382   nucleolin 1 
 ppo-u.5   18101017   nucleolin 2 
 mtr-u.5   11446619   nucleolin 1 
 ghi-r.1   107946108   nucleolin 2 
 ghi-r.1   107928939   nucleolin 1 
 ghi-r.1   107894037   nucleolin 1 
 bna-r.1   106382078   nucleolin 1 
 bna-r.1   106381055   nucleolin 1-like 
 bna-r.1   125575007   nucleolin 1-like 
 cit-r.1   102610503   nucleolin 2 
 sly-u.5   544064   nucleolin-like 
 sot-r.1   102599812   nucleolin 1 
 nta-r.1   107762714   nucleolin 1-like 
 nta-r.1   107776783   uncharacterized LOC107776783 
 osa-u.5   4337032   nucleolin 2-like 
 osa-u.5   4344865   nucleolin 1-like 
 zma-u.5   100194303   uncharacterized LOC100194303 
 tae-r.2   123054607   nucleolin 2 
 tae-r.2   123120521   nucleolin 2 
 tae-r.2   123154406   nucleolin 1 
 hvu-r.1   123427797   nucleolin 2-like 
 hvu-r.1   123411480   nucleolin 1 
 sbi-r.1   8085015   nucleolin 2 
 sbi-r.1   8067716   nucleolin 2 
 bdi-r.1   100836665   nucleolin 1 
 bdi-r.1   100838448   nucleolin 2 
 cre-r.1   CHLRE_06g275100v5   uncharacterized protein 

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Top 50 coexpressed genes to 100262769 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100262769 (vvi-u.5 coexpression data)

CoexMap"100262769"


vviLOC100262769 | Entrez gene ID : 100262769      
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 2 3 2 1 3 3 1 1 1 2 2 1 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
Protein XP_010648398.1 [sequence] [blastp]
XP_010648403.1 [sequence] [blastp]
XP_019081726.1 [sequence] [blastp]
XP_059593730.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1,  cysk 1  (predict for XP_010648398.1)
nucl 9,  chlo 1,  cysk 1  (predict for XP_010648403.1)
nucl 9  (predict for XP_019081726.1)
nucl 9,  chlo 1,  cysk 1  (predict for XP_059593730.1)
Subcellular
localization
TargetP
other 6,  chlo 4  (predict for XP_010648398.1)
other 6,  chlo 4  (predict for XP_010648403.1)
other 6,  chlo 4  (predict for XP_019081726.1)
other 6,  chlo 4  (predict for XP_059593730.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100262769
vvi-r.5
for
100262769
vvi-m.5
for
100262769
vvi-u.5
for
104879270
ath-u.5
for
NUC-L2
ath-u.5
for
NUC-L1
gma-u.5
for
100779929
gma-u.5
for
100786132
bra-r.6
for
103869544
bra-r.6
for
103871689
bra-r.6
for
103868665
ppo-u.5
for
7486382
ppo-u.5
for
18101017
mtr-u.5
for
11446619
ghi-r.1
for
107946108
ghi-r.1
for
107928939
ghi-r.1
for
107894037
bna-r.1
for
106382078
bna-r.1
for
106381055
bna-r.1
for
125575007
cit-r.1
for
102610503
sly-u.5
for
544064
sot-r.1
for
102599812
nta-r.1
for
107762714
nta-r.1
for
107776783
osa-u.5
for
4337032
osa-u.5
for
4344865
zma-u.5
for
100194303
tae-r.2
for
123054607
tae-r.2
for
123120521
tae-r.2
for
123154406
hvu-r.1
for
123427797
hvu-r.1
for
123411480
sbi-r.1
for
8085015
sbi-r.1
for
8067716
bdi-r.1
for
100836665
bdi-r.1
for
100838448
cre-r.1
for
CHLRE_06g275100v5


Ortholog ID: 3223
Species vvi ath ath gma gma bra bra bra ppo ppo mtr ghi ghi ghi bna bna bna cit sly sot nta nta osa osa zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC100262769 NUC-L2 NUC-L1 LOC100779929 LOC100786132 LOC103869544 LOC103871689 LOC103833240 LOC7486382 LOC18101017 LOC11446619 LOC107894037 LOC107920425 LOC107900963 LOC125596200 LOC111202893 LOC106412081 LOC102610503 LOC544064 LOC102599812 LOC107762714 LOC107776783 LOC4337032 LOC4344865 LOC100194303 LOC123054607 LOC123120521 LOC123046749 LOC123427797 LOC123411480 LOC8085015 LOC8067716 LOC100836665 LOC100838448 CHLRE_06g275100v5
Function* nucleolin 2 nucleolin like 2 nucleolin like 1 nucleolin 1 nucleolin 1 nucleolin 2 nucleolin 1 nucleolin 1 nucleolin 1 nucleolin 2 nucleolin 1 nucleolin 1 nucleolin 1 nucleolin 1 nucleolin 1-like nucleolin 1 nucleolin 2 nucleolin 2 nucleolin-like nucleolin 1 nucleolin 1-like uncharacterized LOC107776783 nucleolin 2-like nucleolin 1-like uncharacterized LOC100194303 nucleolin 2 nucleolin 2 nucleolin 2 nucleolin 2-like nucleolin 1 nucleolin 2 nucleolin 2 nucleolin 1 nucleolin 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 3
ath03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 10
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 8
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 9
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
nta03008 Ribosome biogenesis in eukaryotes 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 6
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 3
tae04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 5
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 6
hvu03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
sbi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100262769 821392 841314 100779929 100786132 103869544 103871689 103833240 7486382 18101017 11446619 107894037 107920425 107900963 125596200 111202893 106412081 102610503 544064 102599812 107762714 107776783 4337032 4344865 100194303 123054607 123120521 123046749 123427797 123411480 8085015 8067716 100836665 100838448 66053667
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