ATTED-II : GeneCoexpression result

Species	Gene	Description
tae-r.2	123154406	nucleolin 1
tae-r.2	123046749	nucleolin 2
tae-r.2	123054607	nucleolin 2
tae-r.2	123120521	nucleolin 2
hvu-r.1	123427797	nucleolin 2-like
hvu-r.1	123411480	nucleolin 1
bdi-r.1	100836665	nucleolin 1
bdi-r.1	100838448	nucleolin 2
osa-u.5	4337032	nucleolin 2-like
osa-u.5	4344865	nucleolin 1-like
zma-u.5	100194303	uncharacterized LOC100194303
sbi-r.1	8067716	nucleolin 2
sbi-r.1	8085015	nucleolin 2
ath-u.5	NUC-L2	nucleolin like 2
ath-u.5	NUC-L1	nucleolin like 1
gma-u.5	100779929	nucleolin 1
gma-u.5	100786132	nucleolin 1
sly-u.5	544064	nucleolin-like
bra-r.6	103869544	nucleolin 2
bra-r.6	103833240	nucleolin 1
bra-r.6	103871689	nucleolin 1
vvi-u.5	104879270	nucleolin 2-like
ppo-u.5	7486382	nucleolin 1
ppo-u.5	18101017	nucleolin 2
mtr-u.5	11446619	nucleolin 1
ghi-r.1	107946108	nucleolin 2
ghi-r.1	107928939	nucleolin 1
ghi-r.1	107920425	nucleolin 1
bna-r.1	111212978	nucleolin 1
bna-r.1	106382078	nucleolin 1
bna-r.1	125575007	nucleolin 1-like
sot-r.1	102599812	nucleolin 1
cit-r.1	102610503	nucleolin 2
nta-r.1	107762714	nucleolin 1-like
nta-r.1	107776783	uncharacterized LOC107776783
cre-r.1	CHLRE_06g275100v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0008143 [list] [network] poly(A) binding

(22 genes)

IEA

Protein

XP_044429089.1 [sequence] [blastp]
XP_044429090.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 5, chlo 4	(predict for XP_044429089.1)
nucl 5, chlo 4	(predict for XP_044429090.1)

Subcellular
localization
TargetP

other 4	(predict for XP_044429089.1)
other 4	(predict for XP_044429090.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123154406	tae-r.2 for 123046749	tae-r.2 for 123054607	tae-r.2 for 123120521	hvu-r.1 for 123427797	hvu-r.1 for 123411480	bdi-r.1 for 100836665	bdi-r.1 for 100838448	osa-u.5 for 4337032	osa-u.5 for 4344865	zma-u.5 for 100194303	sbi-r.1 for 8067716	sbi-r.1 for 8085015	ath-u.5 for NUC-L2	ath-u.5 for NUC-L1	gma-u.5 for 100779929	gma-u.5 for 100786132	sly-u.5 for 544064	bra-r.6 for 103869544	bra-r.6 for 103833240	bra-r.6 for 103871689	vvi-u.5 for 104879270	ppo-u.5 for 7486382	ppo-u.5 for 18101017	mtr-u.5 for 11446619	ghi-r.1 for 107946108	ghi-r.1 for 107928939	ghi-r.1 for 107920425	bna-r.1 for 111212978	bna-r.1 for 106382078	bna-r.1 for 125575007	sot-r.1 for 102599812	cit-r.1 for 102610503	nta-r.1 for 107762714	nta-r.1 for 107776783	cre-r.1 for CHLRE_06g275100v5

Ortholog

Ortholog ID: 3223

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

NUC-L2

NUC-L1

Function^*

nucleolin 2

nucleolin 2-like

nucleolin 1

nucleolin 2

nucleolin 2-like

nucleolin 1-like

uncharacterized LOC100194303

nucleolin 2

nucleolin like 2

nucleolin like 1

nucleolin 1

nucleolin-like

nucleolin 2

nucleolin 1

nucleolin 2

nucleolin 1

nucleolin 2

nucleolin 1

nucleolin 1-like

nucleolin 1

nucleolin 2

nucleolin 1

nucleolin 2

nucleolin 1-like

uncharacterized LOC107776783

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00940	Phenylpropanoid biosynthesis	3
tae04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00970	Aminoacyl-tRNA biosynthesis	3
tae03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03008	Ribosome biogenesis in eukaryotes	5
hvu00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03008	Ribosome biogenesis in eukaryotes	6
hvu03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03008	Ribosome biogenesis in eukaryotes	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03008	Ribosome biogenesis in eukaryotes	2
bdi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03008	Ribosome biogenesis in eukaryotes	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03008	Ribosome biogenesis in eukaryotes	6
zma00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03008	Ribosome biogenesis in eukaryotes	4
sbi00970	Aminoacyl-tRNA biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	3
ath03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03008	Ribosome biogenesis in eukaryotes	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	10
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	8
gma00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	9
ppo03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	4
ghi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03008	Ribosome biogenesis in eukaryotes	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03082	ATP-dependent chromatin remodeling	2
nta03008	Ribosome biogenesis in eukaryotes	2
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03008	Ribosome biogenesis in eukaryotes	6

Expression

Expression pattern

Entrez Gene ID^*

123046749

123054607

123120521

123427797

123411480

100836665

100838448

4337032

4344865

100194303

8067716

8085015

821392

841314

100779929

100786132

544064

103869544

103833240

103871689

100262769

7486382

18101017

11446619

107920425

107900963

107894037

125596200

111202893

106412081

102599812

102610503

107762714

107776783

66053667

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 123154406 (tae-r.2 coexpression data)

Top 50 enrichment test to 123154406 (tae-r.2 coexpression data)


Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	2	2	2	1	2	2	2	1	3	1	2	1	3	3	1	1	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123154406 (tae-r.2 coexpression data)

Top 50 enrichment test to 123154406 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**