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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107897848   60S ribosomal protein L13-1 
 ghi-r.1   107950267   60S ribosomal protein L13-1 
 ghi-r.1   107937314   60S ribosomal protein L13-1-like 
 ghi-r.1   107915465   60S ribosomal protein L13-1 
 ath-u.5   BBC1   breast basic conserved 1 
 ath-u.5   AT5G23900   Ribosomal protein L13e family protein 
 bra-r.6   103874976   60S ribosomal protein L13-1 
 bra-r.6   103873508   60S ribosomal protein L13-2 
 bra-r.6   103873096   60S ribosomal protein L13-1 
 bna-r.1   111210580   60S ribosomal protein L13-1-like 
 bna-r.1   111197723   60S ribosomal protein L13-2-like 
 bna-r.1   106447867   60S ribosomal protein L13-1 
 cit-r.1   102614464   60S ribosomal protein L13-1 
 cit-r.1   102613171   60S ribosomal protein L13-1 
 gma-u.5   100499935   60S ribosomal protein L13 
 gma-u.5   100305489   60S ribosomal protein L13-1 
 gma-u.5   100782333   60S ribosomal protein L13-1-like 
 vvi-u.5   100246745   large ribosomal subunit protein eL13z 
 vvi-u.5   100257471   large ribosomal subunit protein eL13z 
 ppo-u.5   7473881   60S ribosomal protein L13-1 
 ppo-u.5   7491903   60S ribosomal protein L13-1 
 ppo-u.5   18094068   60S ribosomal protein L13-1 
 mtr-u.5   11426640   60S ribosomal protein L13-1 
 mtr-u.5   11410980   60S ribosomal protein L13-1 
 mtr-u.5   25482128   60S ribosomal protein L13-1 
 sly-u.5   101262297   large ribosomal subunit protein eL13z 
 sly-u.5   101264241   large ribosomal subunit protein eL13z 
 sot-r.1   102589955   60S ribosomal protein L13-1-like 
 sot-r.1   102591658   60S ribosomal protein L13-1-like 
 sot-r.1   RPL13   ribosomal protein L13 
 nta-r.1   107764897   60S ribosomal protein L13-1-like 
 nta-r.1   107805709   large ribosomal subunit protein eL13z-like 
 nta-r.1   107802841   large ribosomal subunit protein eL13z 
 osa-u.5   4339923   60S ribosomal protein L13-1 
 osa-u.5   4333306   large ribosomal subunit protein eL13y 
 zma-u.5   100282254   60S ribosomal protein L13-2 
 zma-u.5   100273645   60S ribosomal protein L13 
 zma-u.5   100286371   60S ribosomal protein L13 
 tae-r.2   123165450   60S ribosomal protein L13-1 
 tae-r.2   123162399   60S ribosomal protein L13-1 
 tae-r.2   123131777   60S ribosomal protein L13-1 
 hvu-r.1   123401771   60S ribosomal protein L13-1-like 
 hvu-r.1   123407934   60S ribosomal protein L13-1-like 
 sbi-r.1   8080961   60S ribosomal protein L13-2 
 sbi-r.1   8079817   60S ribosomal protein L13-2 
 sbi-r.1   8064692   60S ribosomal protein L13-2 
 bdi-r.1   100825017   60S ribosomal protein L13-1 
 bdi-r.1   100830340   60S ribosomal protein L13-1 
 cre-r.1   CHLRE_14g630100v5   ribosomal protein L13 

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Top 50 coexpressed genes to 107897848 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107897848 (ghi-r.1 coexpression data)

CoexMap"107897848"


ghiLOC107897848 | Entrez gene ID : 107897848    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 3 2 3 2 3 3 2 3 3 2 3 3 2 3 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03010 [list] [network] Ribosome (2429 genes)
GO BP
GO:0006412 [list] [network] translation  (1487 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (467 genes)  IEA  
GO:0005840 [list] [network] ribosome  (1110 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (1075 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
Protein XP_016678919.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  cyto 1,  mito 1  (predict for XP_016678919.1)
Subcellular
localization
TargetP
other 6,  chlo 3  (predict for XP_016678919.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107897848
ghi-r.1
for
107950267
ghi-r.1
for
107937314
ghi-r.1
for
107915465
ath-u.5
for
BBC1
ath-u.5
for
AT5G23900
bra-r.6
for
103874976
bra-r.6
for
103873508
bra-r.6
for
103873096
bna-r.1
for
111210580
bna-r.1
for
111197723
bna-r.1
for
106447867
cit-r.1
for
102614464
cit-r.1
for
102613171
gma-u.5
for
100499935
gma-u.5
for
100305489
gma-u.5
for
100782333
vvi-u.5
for
100246745
vvi-u.5
for
100257471
ppo-u.5
for
7473881
ppo-u.5
for
7491903
ppo-u.5
for
18094068
mtr-u.5
for
11426640
mtr-u.5
for
11410980
mtr-u.5
for
25482128
sly-u.5
for
101262297
sly-u.5
for
101264241
sot-r.1
for
102589955
sot-r.1
for
102591658
sot-r.1
for
RPL13
nta-r.1
for
107764897
nta-r.1
for
107805709
nta-r.1
for
107802841
osa-u.5
for
4339923
osa-u.5
for
4333306
zma-u.5
for
100282254
zma-u.5
for
100273645
zma-u.5
for
100286371
tae-r.2
for
123165450
tae-r.2
for
123162399
tae-r.2
for
123131777
hvu-r.1
for
123401771
hvu-r.1
for
123407934
sbi-r.1
for
8080961
sbi-r.1
for
8079817
sbi-r.1
for
8064692
bdi-r.1
for
100825017
bdi-r.1
for
100830340
cre-r.1
for
CHLRE_14g630100v5


Ortholog ID: 1982
Species ghi ghi ghi ath ath bra bra bra bna bna bna cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr mtr sly sly sot sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi sbi bdi bdi cre
Symbol LOC107937314 LOC107954756 LOC121232132 BBC1 AT5G23900 LOC103874976 LOC103873096 LOC103865696 LOC111197723 LOC106366026 LOC106365518 LOC102614464 LOC102613171 LOC100499935 LOC100305489 LOC100805957 LOC100246745 LOC100257471 LOC7473881 LOC7491903 LOC7467594 LOC11426640 LOC11410980 LOC25482128 LOC101262297 LOC101264241 LOC102589955 LOC102591658 RPL13 LOC107764897 LOC107805709 LOC107770287 LOC4339923 LOC4333306 LOC100282254 LOC100273645 LOC100286371 LOC123165450 LOC123162399 LOC123131777 LOC123401771 LOC123407934 LOC8080961 LOC8079817 LOC8064692 LOC100825017 LOC100830340 CHLRE_14g630100v5
Function* 60S ribosomal protein L13-1-like 60S ribosomal protein L13-1 60S ribosomal protein L13-1 breast basic conserved 1 Ribosomal protein L13e family protein 60S ribosomal protein L13-1 60S ribosomal protein L13-1 60S ribosomal protein L13-3 60S ribosomal protein L13-2-like 60S ribosomal protein L13-3-like 60S ribosomal protein L13-2-like 60S ribosomal protein L13-1 60S ribosomal protein L13-1 60S ribosomal protein L13 60S ribosomal protein L13-1 60S ribosomal protein L13-1 large ribosomal subunit protein eL13z large ribosomal subunit protein eL13z 60S ribosomal protein L13-1 60S ribosomal protein L13-1 60S ribosomal protein L13-1 60S ribosomal protein L13-1 60S ribosomal protein L13-1 60S ribosomal protein L13-1 large ribosomal subunit protein eL13z large ribosomal subunit protein eL13z 60S ribosomal protein L13-1-like 60S ribosomal protein L13-1-like ribosomal protein L13 60S ribosomal protein L13-1-like large ribosomal subunit protein eL13z-like large ribosomal subunit protein eL13y-like 60S ribosomal protein L13-1 large ribosomal subunit protein eL13y 60S ribosomal protein L13-2 60S ribosomal protein L13 60S ribosomal protein L13 60S ribosomal protein L13-1 60S ribosomal protein L13-1 60S ribosomal protein L13-1 60S ribosomal protein L13-1-like 60S ribosomal protein L13-1-like 60S ribosomal protein L13-2 60S ribosomal protein L13-2 60S ribosomal protein L13-2 60S ribosomal protein L13-1 60S ribosomal protein L13-1 ribosomal protein L13
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 17
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 16
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 17
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 12
bra00220 Arginine biosynthesis 2
bra00250 Alanine, aspartate and glutamate metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 13
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 19
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 15
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 18
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 18
sbi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 18
cre00290 Valine, leucine and isoleucine biosynthesis 2
cre01210 2-Oxocarboxylic acid metabolism 2
cre01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107937314 107954756 121232132 824062 832455 103874976 103873096 103865696 111197723 106366026 106365518 102614464 102613171 100499935 100305489 100805957 100246745 100257471 7473881 7491903 7467594 11426640 11410980 25482128 101262297 101264241 102589955 102591658 102603931 107764897 107805709 107770287 4339923 4333306 100282254 100273645 100286371 123165450 123162399 123131777 123401771 123407934 8080961 8079817 8064692 100825017 100830340 5718254
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