Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107903363   cleavage stimulation factor subunit 77 
 ath-u.5   CSTF77   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100799377   cleavage stimulation factor subunit 77 
 vvi-u.5   100262033   cleavage stimulation factor subunit 77 
 ppo-u.5   7465490   cleavage stimulation factor subunit 77 
 mtr-u.5   11408840   cleavage stimulation factor subunit 77 
 sly-u.5   101249869   cleavage stimulation factor subunit 77 
 osa-u.5   4352587   cleavage stimulation factor subunit 77 
 zma-u.5   100278777   uncharacterized LOC100278777 

close


Top 50 coexpressed genes to 107903363 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 107903363 (ghi-r.1 coexpression data)

CoexMap"107903363"


ghiLOC107903363 | Entrez gene ID : 107903363    
Species ghi ath gma vvi ppo mtr sly osa zma hvu bna cit bra sbi bdi nta tae cre sot
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03015 [list] [network] mRNA surveillance pathway (365 genes)
GO BP
GO:0031124 [list] [network] mRNA 3'-end processing  (35 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (890 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016684869.1 [sequence] [blastp]
XP_016684870.1 [sequence] [blastp]
XP_040952008.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  chlo 2,  cyto 1,  pero 1,  golg 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_016684869.1)
nucl 5,  nucl_plas 3,  chlo 3,  cyto 1,  mito 1  (predict for XP_016684870.1)
nucl 4,  chlo 2,  cysk_nucl 2,  cyto 1  (predict for XP_040952008.1)
Subcellular
localization
TargetP
other 7,  scret 4  (predict for XP_016684869.1)
other 6  (predict for XP_016684870.1)
scret 8,  other 3  (predict for XP_040952008.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107903363
ath-u.5
for
CSTF77
gma-u.5
for
100799377
vvi-u.5
for
100262033
ppo-u.5
for
7465490
mtr-u.5
for
11408840
sly-u.5
for
101249869
osa-u.5
for
4352587
zma-u.5
for
100278777


Ortholog ID: 10461
Species ghi ghi ath bra bna bna cit gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC107942974 LOC107903363 CSTF77 LOC103835942 LOC106389262 LOC106387632 LOC102629682 LOC100799377 LOC100262033 LOC7465490 LOC11408840 LOC101249869 LOC102602868 LOC107827044 LOC107798403 LOC4352587 LOC100278777 LOC123077153 LOC123060144 LOC123442691 LOC8066574 LOC100838953 CHLRE_12g506050v5
Function* cleavage stimulation factor subunit 77 cleavage stimulation factor subunit 77 Tetratricopeptide repeat (TPR)-like superfamily protein cleavage stimulation factor subunit 77 cleavage stimulation factor subunit 77 cleavage stimulation factor subunit 77-like cleavage stimulation factor subunit 77 cleavage stimulation factor subunit 77 cleavage stimulation factor subunit 77 cleavage stimulation factor subunit 77 cleavage stimulation factor subunit 77 cleavage stimulation factor subunit 77 cleavage stimulation factor subunit 77 cleavage stimulation factor subunit 77 cleavage stimulation factor subunit 77 cleavage stimulation factor subunit 77 uncharacterized LOC100278777 cleavage stimulation factor subunit 77 cleavage stimulation factor subunit 77 cleavage stimulation factor subunit 77 cleavage stimulation factor subunit 77 cleavage stimulation factor subunit 77 uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 3
ath03015 mRNA surveillance pathway 2
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
gma04144 Endocytosis 2
gma04517 IgSF CAM signaling 2
gma05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
vvi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
ppo03013 Nucleocytoplasmic transport 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04142 Lysosome 3
sly04144 Endocytosis 3
sly05100 Bacterial invasion of epithelial cells 3
sly03040 Spliceosome 2
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 5
nta03015 mRNA surveillance pathway 2
nta00450 Selenocompound metabolism 2
nta03008 Ribosome biogenesis in eukaryotes 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta03018 RNA degradation 2
nta00350 Tyrosine metabolism 2
nta00360 Phenylalanine metabolism 2
nta00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 5
hvu03015 mRNA surveillance pathway 3
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 4
sbi03040 Spliceosome 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03460 Fanconi anemia pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107942974 107903363 838354 103835942 106389262 106387632 102629682 100799377 100262033 7465490 11408840 101249869 102602868 107827044 107798403 4352587 100278777 123077153 123060144 123442691 8066574 100838953 5716476
The preparation time of this page was 0.1 [sec].