Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107905226   proteasome subunit beta type-3-A 
 ghi-r.1   121230380   proteasome subunit beta type-3-A 
 ghi-r.1   121229051   proteasome subunit beta type-3-A 
 ghi-r.1   107951479   proteasome subunit beta type-3-A 
 ath-u.5   PBC1   proteasome beta subunit C1 
 ath-u.5   PBC2   20S proteasome beta subunit C2 
 bra-r.6   103853073   proteasome subunit beta type-3-A 
 bra-r.6   103835733   proteasome subunit beta type-3-A 
 bra-r.6   103873015   proteasome subunit beta type-3-A 
 bna-r.1   106397178   proteasome subunit beta type-3-A 
 bna-r.1   106347382   proteasome subunit beta type-3-A 
 bna-r.1   106348600   proteasome subunit beta type-3-A 
 cit-r.1   102614137   proteasome subunit beta type-3-A 
 gma-u.5   100499664   proteasome beta subunit C1 
 gma-u.5   100527027   20S proteasome beta subunit C1 
 gma-u.5   100306084   putative proteasome beta subunit C1 
 vvi-u.5   100250625   proteasome subunit beta type-like 
 ppo-u.5   7460968   proteasome subunit beta type-3-A 
 ppo-u.5   7460354   proteasome subunit beta type-3-A 
 mtr-u.5   11445740   proteasome subunit beta type-3-A 
 mtr-u.5   11417396   proteasome subunit beta type-3-A 
 sly-u.5   101259528   proteasome subunit beta type-3-A 
 sot-r.1   102599420   proteasome subunit beta type-3-A 
 nta-r.1   107776809   proteasome subunit beta type-3-A 
 nta-r.1   107817251   proteasome subunit beta type-3-A-like 
 nta-r.1   107826949   proteasome subunit beta type-3-A 
 osa-u.5   4341637   proteasome subunit beta type-3-like 
 osa-u.5   4328517   proteasome subunit beta type-3-like 
 zma-u.5   100272320   Proteasome subunit beta type 
 zma-u.5   100274112   uncharacterized LOC100274112 
 zma-u.5   100382784   uncharacterized LOC100382784 
 tae-r.2   123136532   proteasome subunit beta type-3 
 tae-r.2   123167383   proteasome subunit beta type-3 
 tae-r.2   123161414   proteasome subunit beta type-3 
 hvu-r.1   123411078   proteasome subunit beta type-3-like 
 hvu-r.1   123403355   proteasome subunit beta type-3 
 sbi-r.1   8079409   proteasome subunit beta type-3 
 sbi-r.1   8067705   proteasome subunit beta type-3 
 bdi-r.1   100831014   proteasome subunit beta type-3 
 bdi-r.1   100822862   proteasome subunit beta type-3 
 cre-r.1   CHLRE_06g267500v5   uncharacterized protein 

close


Top 50 coexpressed genes to 107905226 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 107905226 (ghi-r.1 coexpression data)

CoexMap"107905226"


ghiLOC107905226 | Entrez gene ID : 107905226    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 3 1 3 1 2 2 1 1 3 2 3 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03050 [list] [network] Proteasome (162 genes)
GO BP
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (406 genes)  IEA  
GO CC
GO:0019774 [list] [network] proteasome core complex, beta-subunit complex  (16 genes)  IEA  
GO:0005839 [list] [network] proteasome core complex  (69 genes)  IEA  
GO MF
Protein XP_016687310.1 [sequence] [blastp]
XP_016687311.1 [sequence] [blastp]
XP_016687312.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  chlo 3  (predict for XP_016687310.1)
cyto 7,  chlo 3  (predict for XP_016687311.1)
chlo 4,  cyto 3,  nucl 2,  plas 1,  pero 1  (predict for XP_016687312.1)
Subcellular
localization
TargetP
scret 6,  other 3  (predict for XP_016687310.1)
scret 5,  other 3  (predict for XP_016687311.1)
other 5,  mito 4  (predict for XP_016687312.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107905226
ghi-r.1
for
121230380
ghi-r.1
for
121229051
ghi-r.1
for
107951479
ath-u.5
for
PBC1
ath-u.5
for
PBC2
bra-r.6
for
103853073
bra-r.6
for
103835733
bra-r.6
for
103873015
bna-r.1
for
106397178
bna-r.1
for
106347382
bna-r.1
for
106348600
cit-r.1
for
102614137
gma-u.5
for
100499664
gma-u.5
for
100527027
gma-u.5
for
100306084
vvi-u.5
for
100250625
ppo-u.5
for
7460968
ppo-u.5
for
7460354
mtr-u.5
for
11445740
mtr-u.5
for
11417396
sly-u.5
for
101259528
sot-r.1
for
102599420
nta-r.1
for
107776809
nta-r.1
for
107817251
nta-r.1
for
107826949
osa-u.5
for
4341637
osa-u.5
for
4328517
zma-u.5
for
100272320
zma-u.5
for
100274112
zma-u.5
for
100382784
tae-r.2
for
123136532
tae-r.2
for
123167383
tae-r.2
for
123161414
hvu-r.1
for
123411078
hvu-r.1
for
123403355
sbi-r.1
for
8079409
sbi-r.1
for
8067705
bdi-r.1
for
100831014
bdi-r.1
for
100822862
cre-r.1
for
CHLRE_06g267500v5


Ortholog ID: 3164
Species ghi ghi ghi ath ath bra bra bra bna bna bna cit gma gma gma vvi ppo ppo mtr mtr sly sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC107905226 LOC121230380 LOC107951479 PBC1 PBC2 LOC103853073 LOC103835733 LOC103837936 LOC106348600 LOC106396984 LOC106446603 LOC102614137 LOC100499664 LOC100527027 LOC100306084 LOC100250625 LOC7460968 LOC7460354 LOC11445740 LOC11417396 LOC101259528 LOC102599420 LOC107776809 LOC107817251 LOC107826949 LOC4341637 LOC4328517 LOC100272320 LOC100274112 LOC100382784 LOC123136532 LOC123149572 LOC123132460 LOC123411078 LOC123403355 LOC8079409 LOC8067705 LOC100831014 LOC100822862 CHLRE_06g267500v5
Function* proteasome subunit beta type-3-A proteasome subunit beta type-3-A proteasome subunit beta type-3-A proteasome beta subunit C1 20S proteasome beta subunit C2 proteasome subunit beta type-3-A proteasome subunit beta type-3-A proteasome subunit beta type-3-A proteasome subunit beta type-3-A proteasome subunit beta type-3-A proteasome subunit beta type-3-A-like proteasome subunit beta type-3-A proteasome beta subunit C1 20S proteasome beta subunit C1 putative proteasome beta subunit C1 proteasome subunit beta type-like proteasome subunit beta type-3-A proteasome subunit beta type-3-A proteasome subunit beta type-3-A proteasome subunit beta type-3-A proteasome subunit beta type-3-A proteasome subunit beta type-3-A proteasome subunit beta type-3-A proteasome subunit beta type-3-A-like proteasome subunit beta type-3-A proteasome subunit beta type-3-like proteasome subunit beta type-3-like Proteasome subunit beta type uncharacterized LOC100274112 uncharacterized LOC100382784 proteasome subunit beta type-3 proteasome subunit beta type-3 proteasome subunit beta type-3 proteasome subunit beta type-3-like proteasome subunit beta type-3 proteasome subunit beta type-3 proteasome subunit beta type-3 proteasome subunit beta type-3 proteasome subunit beta type-3 uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 12
ghi00030 Pentose phosphate pathway 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 10
ghi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 18
ghi00030 Pentose phosphate pathway 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 3
bra03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 7
bna03020 RNA polymerase 3
bna03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 9
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 14
cit03040 Spliceosome 2
cit00510 N-Glycan biosynthesis 2
cit00513 Various types of N-glycan biosynthesis 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 9
gma00190 Oxidative phosphorylation 3
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 15
vvi03420 Nucleotide excision repair 2
vvi04120 Ubiquitin mediated proteolysis 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 6
ppo03015 mRNA surveillance pathway 3
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 10
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 11
nta03018 RNA degradation 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 10
nta04120 Ubiquitin mediated proteolysis 2
nta00190 Oxidative phosphorylation 2
nta00020 Citrate cycle (TCA cycle) 2
nta00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 10
nta04120 Ubiquitin mediated proteolysis 2
nta00020 Citrate cycle (TCA cycle) 2
nta00270 Cysteine and methionine metabolism 2
nta00566 Sulfoquinovose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 13
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 4
tae03420 Nucleotide excision repair 2
tae04141 Protein processing in endoplasmic reticulum 2
tae00520 Amino sugar and nucleotide sugar metabolism 2
tae01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 7
tae04141 Protein processing in endoplasmic reticulum 3
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 10
hvu00010 Glycolysis / Gluconeogenesis 2
hvu00030 Pentose phosphate pathway 2
hvu00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
hvu04130 SNARE interactions in vesicular transport 2
hvu03420 Nucleotide excision repair 2
hvu00510 N-Glycan biosynthesis 2
hvu00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 9
sbi00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 10
sbi00071 Fatty acid degradation 2
sbi00280 Valine, leucine and isoleucine degradation 2
sbi00310 Lysine degradation 2
sbi00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 6
bdi04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 19
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107905226 121230380 107951479 838776 844080 103853073 103835733 103837936 106348600 106396984 106446603 102614137 100499664 100527027 100306084 100250625 7460968 7460354 11445740 11417396 101259528 102599420 107776809 107817251 107826949 4341637 4328517 100272320 100274112 100382784 123136532 123149572 123132460 123411078 123403355 8079409 8067705 100831014 100822862 5721912
The preparation time of this page was 0.2 [sec].