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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1  107905539  E3 ubiquitin-protein ligase ATL23 
 ath-u.5  AT5G42200  RING/U-box superfamily protein 
 gma-u.5  100776003  E3 ubiquitin-protein ligase ATL23 
 gma-u.5  100811160  E3 ubiquitin-protein ligase ATL23 
 vvi-u.5  104879547  RING-H2 finger protein ATL56-like 
 vvi-u.5  104878763  RING-H2 finger protein ATL80 
 ppo-u.5  7490624  E3 ubiquitin-protein ligase ATL23 
 ppo-u.5  7493995  E3 ubiquitin-protein ligase ATL23 
 mtr-u.5  120577925  E3 ubiquitin-protein ligase ATL23 
 mtr-u.5  11432144  E3 ubiquitin-protein ligase ATL23 
 sly-u.5  101245541  E3 ubiquitin-protein ligase ATL23 
 osa-u.5  4340729  RING-H2 finger protein ATL52 

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Top 50 coexpressed genes to 107905539 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107905539 (ghi-r.1 coexpression data)

CoexMap"107905539"


ghiLOC107905539 | Entrez gene ID : 107905539
Species ghi ath gma vvi ppo mtr sly osa hvu zma bna cit bra sbi bdi nta tae cre sot
Paralog 1 1 2 2 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_016687692.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  E.R. 2,  chlo_mito 2,  mito 1,  vacu 1,  E.R._plas 1,  cyto_E.R. 1  (predict for XP_016687692.1)
Subcellular
localization
TargetP
other 5  (predict for XP_016687692.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ghi-r.1
for
107905539


ath-u.5
for
AT5G42200


gma-u.5
for
100776003


gma-u.5
for
100811160


vvi-u.5
for
104879547


vvi-u.5
for
104878763


ppo-u.5
for
7490624


ppo-u.5
for
7493995


mtr-u.5
for
120577925


mtr-u.5
for
11432144


sly-u.5
for
101245541


osa-u.5
for
4340729



Ortholog ID: 1553
Species ghi ath bra bna cit gma ppo ppo sly sot sot nta bdi
Symbol LOC107905539 AT5G42200 LOC103832296 LOC111202631 LOC112498303 LOC102667575 LOC7490624 LOC7493995 LOC101245541 LOC102588173 LOC102579819 LOC107813148 LOC100834671
Function* E3 ubiquitin-protein ligase ATL23 RING/U-box superfamily protein E3 ubiquitin-protein ligase ATL23 E3 ubiquitin-protein ligase ATL23-like RING-H2 finger protein ATL56-like E3 ubiquitin-protein ligase ATL23 E3 ubiquitin-protein ligase ATL23 E3 ubiquitin-protein ligase ATL23 E3 ubiquitin-protein ligase ATL23 RING-H2 finger protein ATL3-like E3 ubiquitin-protein ligase ATL23 RING-H2 finger protein ATL77-like E3 ubiquitin-protein ligase ATL23
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00562 Inositol phosphate metabolism 4
bna00564 Glycerophospholipid metabolism 4
bna00565 Ether lipid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107905539 834225 103832296 111202631 112498303 102667575 7490624 7493995 101245541 102588173 102579819 107813148 100834671
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