Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1  112498303  RING-H2 finger protein ATL56-like 
 cit-r.1  107176377  E3 ubiquitin-protein ligase ATL23 
 ath-u.5  AT5G42200  RING/U-box superfamily protein 
 bra-r.6  103832296  E3 ubiquitin-protein ligase ATL23 
 ghi-r.1  107958200  E3 ubiquitin-protein ligase ATL23 
 ghi-r.1  107938144  E3 ubiquitin-protein ligase ATL23 
 bna-r.1  111202631  E3 ubiquitin-protein ligase ATL23-like 
 vvi-u.5  100267702  E3 ubiquitin-protein ligase ATL23 
 vvi-u.5  100853467  RING-H2 finger protein ATL56 
 ppo-u.5  7493995  E3 ubiquitin-protein ligase ATL23 
 ppo-u.5  7490624  E3 ubiquitin-protein ligase ATL23 
 mtr-u.5  120577925  E3 ubiquitin-protein ligase ATL23 
 sly-u.5  101245541  E3 ubiquitin-protein ligase ATL23 
 sot-r.1  102588173  RING-H2 finger protein ATL3-like 
 sot-r.1  102579819  E3 ubiquitin-protein ligase ATL23 
 nta-r.1  107813148  RING-H2 finger protein ATL77-like 
 nta-r.1  107811578  uncharacterized LOC107811578 
 osa-u.5  4340729  RING-H2 finger protein ATL52 

close


Top 50 coexpressed genes to 112498303 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 112498303 (cit-r.1 coexpression data)

CoexMap"112498303"


citLOC112498303 | Entrez gene ID : 112498303
Species cit ath bra ghi bna vvi ppo mtr sly sot nta osa bdi tae zma sbi hvu cre gma
Paralog 2 1 1 2 1 2 2 1 1 2 2 1 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_052294208.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_052294208.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_052294208.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

cit-r.1
for
112498303


cit-r.1
for
107176377


ath-u.5
for
AT5G42200


bra-r.6
for
103832296


ghi-r.1
for
107958200


ghi-r.1
for
107938144


bna-r.1
for
111202631


vvi-u.5
for
100267702


vvi-u.5
for
100853467


ppo-u.5
for
7493995


ppo-u.5
for
7490624


mtr-u.5
for
120577925


sly-u.5
for
101245541


sot-r.1
for
102588173


sot-r.1
for
102579819


nta-r.1
for
107813148


nta-r.1
for
107811578


osa-u.5
for
4340729



Ortholog ID: 1553
Species cit cit ath bra ghi ghi bna gma gma vvi ppo ppo mtr sly sot sot nta nta osa bdi
Symbol LOC112498303 LOC107176377 AT5G42200 LOC103832296 LOC107938144 LOC107905539 LOC111202631 LOC100776003 LOC102667575 LOC104878763 LOC7493995 LOC7490624 LOC120577925 LOC101245541 LOC102588173 LOC102579819 LOC107813148 LOC107798329 LOC107280049 LOC100834671
Function* RING-H2 finger protein ATL56-like E3 ubiquitin-protein ligase ATL23 RING/U-box superfamily protein E3 ubiquitin-protein ligase ATL23 E3 ubiquitin-protein ligase ATL23 E3 ubiquitin-protein ligase ATL23 E3 ubiquitin-protein ligase ATL23-like E3 ubiquitin-protein ligase ATL23 E3 ubiquitin-protein ligase ATL23 RING-H2 finger protein ATL80 E3 ubiquitin-protein ligase ATL23 E3 ubiquitin-protein ligase ATL23 E3 ubiquitin-protein ligase ATL23 E3 ubiquitin-protein ligase ATL23 RING-H2 finger protein ATL3-like E3 ubiquitin-protein ligase ATL23 RING-H2 finger protein ATL77-like E3 ubiquitin-protein ligase ATL23-like E3 ubiquitin-protein ligase ATL41-like E3 ubiquitin-protein ligase ATL23
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 3
ghi04626 Plant-pathogen interaction 3
ghi00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00562 Inositol phosphate metabolism 4
bna00564 Glycerophospholipid metabolism 4
bna00565 Ether lipid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 3
nta04120 Ubiquitin mediated proteolysis 2
nta04081 Hormone signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 112498303 107176377 834225 103832296 107938144 107905539 111202631 100776003 102667575 104878763 7493995 7490624 120577925 101245541 102588173 102579819 107813148 107798329 107280049 100834671
The preparation time of this page was 0.1 [sec].