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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107938144   E3 ubiquitin-protein ligase ATL23 
 ghi-r.1   107958200   E3 ubiquitin-protein ligase ATL23 
 ath-u.5   AT5G42200   RING/U-box superfamily protein 
 bra-r.6   103832296   E3 ubiquitin-protein ligase ATL23 
 bna-r.1   111202631   E3 ubiquitin-protein ligase ATL23-like 
 cit-r.1   107176377   E3 ubiquitin-protein ligase ATL23 
 cit-r.1   112498303   RING-H2 finger protein ATL56-like 
 gma-u.5   100776003   E3 ubiquitin-protein ligase ATL23 
 gma-u.5   100811160   E3 ubiquitin-protein ligase ATL23 
 vvi-u.5   104879547   RING-H2 finger protein ATL56-like 
 vvi-u.5   104878763   RING-H2 finger protein ATL80 
 ppo-u.5   7490624   E3 ubiquitin-protein ligase ATL23 
 ppo-u.5   7493995   E3 ubiquitin-protein ligase ATL23 
 mtr-u.5   120577925   E3 ubiquitin-protein ligase ATL23 
 mtr-u.5   11432144   E3 ubiquitin-protein ligase ATL23 
 sly-u.5   101245541   E3 ubiquitin-protein ligase ATL23 
 sot-r.1   102588173   RING-H2 finger protein ATL3-like 
 sot-r.1   102579819   E3 ubiquitin-protein ligase ATL23 
 nta-r.1   107784640   E3 ubiquitin-protein ligase ATL23-like 
 nta-r.1   107798329   E3 ubiquitin-protein ligase ATL23-like 
 nta-r.1   107779567   uncharacterized LOC107779567 
 osa-u.5   4340729   RING-H2 finger protein ATL52 

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Top 50 coexpressed genes to 107938144 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107938144 (ghi-r.1 coexpression data)

CoexMap"107938144"


ghiLOC107938144 | Entrez gene ID : 107938144    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa bdi tae zma cre sbi hvu
Paralog 2 1 1 1 2 2 2 2 2 1 2 3 1 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_016726709.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 1,  nucl 1,  extr 1,  vacu 1,  E.R. 1,  cyto_mito 1,  E.R._vacu 1,  mito_plas 1  (predict for XP_016726709.1)
Subcellular
localization
TargetP
other 5  (predict for XP_016726709.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107938144
ghi-r.1
for
107958200
ath-u.5
for
AT5G42200
bra-r.6
for
103832296
bna-r.1
for
111202631
cit-r.1
for
107176377
cit-r.1
for
112498303
gma-u.5
for
100776003
gma-u.5
for
100811160
vvi-u.5
for
104879547
vvi-u.5
for
104878763
ppo-u.5
for
7490624
ppo-u.5
for
7493995
mtr-u.5
for
120577925
mtr-u.5
for
11432144
sly-u.5
for
101245541
sot-r.1
for
102588173
sot-r.1
for
102579819
nta-r.1
for
107784640
nta-r.1
for
107798329
nta-r.1
for
107779567
osa-u.5
for
4340729


Ortholog ID: 1553
Species ghi ghi ath bra bna cit cit gma gma vvi ppo ppo mtr sly sot sot nta nta osa bdi
Symbol LOC107938144 LOC107905539 AT5G42200 LOC103832296 LOC111202631 LOC107176377 LOC112498303 LOC100776003 LOC102667575 LOC104878763 LOC7490624 LOC7493995 LOC120577925 LOC101245541 LOC102588173 LOC102579819 LOC107798329 LOC107813148 LOC107280049 LOC100834671
Function* E3 ubiquitin-protein ligase ATL23 E3 ubiquitin-protein ligase ATL23 RING/U-box superfamily protein E3 ubiquitin-protein ligase ATL23 E3 ubiquitin-protein ligase ATL23-like E3 ubiquitin-protein ligase ATL23 RING-H2 finger protein ATL56-like E3 ubiquitin-protein ligase ATL23 E3 ubiquitin-protein ligase ATL23 RING-H2 finger protein ATL80 E3 ubiquitin-protein ligase ATL23 E3 ubiquitin-protein ligase ATL23 E3 ubiquitin-protein ligase ATL23 E3 ubiquitin-protein ligase ATL23 RING-H2 finger protein ATL3-like E3 ubiquitin-protein ligase ATL23 E3 ubiquitin-protein ligase ATL23-like RING-H2 finger protein ATL77-like E3 ubiquitin-protein ligase ATL41-like E3 ubiquitin-protein ligase ATL23
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 3
ghi04626 Plant-pathogen interaction 3
ghi00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00562 Inositol phosphate metabolism 4
bna00564 Glycerophospholipid metabolism 4
bna00565 Ether lipid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 3
nta04120 Ubiquitin mediated proteolysis 2
nta04081 Hormone signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107938144 107905539 834225 103832296 111202631 107176377 112498303 100776003 102667575 104878763 7490624 7493995 120577925 101245541 102588173 102579819 107798329 107813148 107280049 100834671
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