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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107910520   50S ribosomal protein L3-2, mitochondrial 
 ath-u.5   RPL3P   ribosomal protein L3 plastid 
 gma-u.5   100794289   50S ribosomal protein L3-2, mitochondrial 
 gma-u.5   100775496   50S ribosomal protein L3-2, mitochondrial 
 vvi-u.5   100257955   large ribosomal subunit protein uL3m 
 ppo-u.5   7477200   50S ribosomal protein L3-2, mitochondrial 
 ppo-u.5   18101736   50S ribosomal protein L3-2, mitochondrial 
 mtr-u.5   25487658   50S ribosomal protein L3-2, mitochondrial 
 mtr-u.5   11422949   50S ribosomal protein L3-2, mitochondrial 
 mtr-u.5   11424090   50S ribosomal protein L3-2, mitochondrial 
 sly-u.5   101262501   large ribosomal subunit protein uL3m 
 osa-u.5   4327104   large ribosomal subunit protein uL3m 
 zma-u.5   100191826   50S ribosomal protein L3, mitochondrial-like 

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Top 50 coexpressed genes to 107910520 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107910520 (ghi-r.1 coexpression data)

CoexMap"107910520"


ghiLOC107910520 | Entrez gene ID : 107910520    
Species ghi ath gma vvi ppo mtr sly osa zma hvu bna cit bra sbi bdi nta tae cre sot
Paralog 1 1 2 1 2 3 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03010 [list] [network] Ribosome (2429 genes)
GO BP
GO:0006412 [list] [network] translation  (1487 genes)  IEA  
GO CC
GO:0005762 [list] [network] mitochondrial large ribosomal subunit  (54 genes)  IEA  
GO:0005840 [list] [network] ribosome  (1110 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (1075 genes)  IEA  
Protein XP_040944182.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1,  cyto 1,  mito 1,  cyto_nucl 1  (predict for XP_040944182.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_040944182.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107910520
ath-u.5
for
RPL3P
gma-u.5
for
100794289
gma-u.5
for
100775496
vvi-u.5
for
100257955
ppo-u.5
for
7477200
ppo-u.5
for
18101736
mtr-u.5
for
25487658
mtr-u.5
for
11422949
mtr-u.5
for
11424090
sly-u.5
for
101262501
osa-u.5
for
4327104
zma-u.5
for
100191826


Ortholog ID: 5742
Species ghi ghi ath bra bra bna bna cit gma gma vvi ppo ppo mtr mtr sly sot sot nta nta osa zma tae tae hvu sbi cre
Symbol LOC107910520 LOC107951544 RPL3P LOC103839203 LOC103869683 LOC111207170 LOC106411286 LOC102613999 LOC100775496 LOC100794289 LOC100257955 LOC7477200 LOC18101736 LOC25487658 LOC11424090 LOC101262501 LOC102579491 LOC102580539 LOC107830586 LOC107831882 LOC4327104 LOC100191826 LOC123069537 LOC123078023 LOC123443365 LOC8085797 CHLRE_01g022250v5
Function* 50S ribosomal protein L3-2, mitochondrial 50S ribosomal protein L3-2, mitochondrial ribosomal protein L3 plastid 50S ribosomal protein L3-2, mitochondrial 50S ribosomal protein L3-2, mitochondrial 50S ribosomal protein L3-2, mitochondrial 50S ribosomal protein L3-2, mitochondrial-like 50S ribosomal protein L3-2, mitochondrial 50S ribosomal protein L3-2, mitochondrial 50S ribosomal protein L3-2, mitochondrial large ribosomal subunit protein uL3m 50S ribosomal protein L3-2, mitochondrial 50S ribosomal protein L3-2, mitochondrial 50S ribosomal protein L3-2, mitochondrial 50S ribosomal protein L3-2, mitochondrial large ribosomal subunit protein uL3m 50S ribosomal protein L3-2, chloroplastic-like 50S ribosomal protein L3-2, chloroplastic-like large ribosomal subunit protein uL3m large ribosomal subunit protein uL3m large ribosomal subunit protein uL3m 50S ribosomal protein L3, mitochondrial-like 50S ribosomal protein L3-2, mitochondrial 50S ribosomal protein L3-2, mitochondrial 50S ribosomal protein L3-2, mitochondrial 50S ribosomal protein L3-2, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
ghi04626 Plant-pathogen interaction 2
ghi03030 DNA replication 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi04626 Plant-pathogen interaction 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 4
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
bra03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
bra03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 5
cit03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
gma03010 Ribosome 3
gma03040 Spliceosome 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
gma03010 Ribosome 3
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 10
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 13
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly03013 Nucleocytoplasmic transport 2
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta03060 Protein export 2
nta03030 DNA replication 2
nta03410 Base excision repair 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 5
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 8
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107910520 107951544 821011 103839203 103869683 111207170 106411286 102613999 100775496 100794289 100257955 7477200 18101736 25487658 11424090 101262501 102579491 102580539 107830586 107831882 4327104 100191826 123069537 123078023 123443365 8085797 5715221
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