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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102579491   50S ribosomal protein L3-2, chloroplastic-like 
 sly-u.5   101262501   large ribosomal subunit protein uL3m 
 ath-u.5   RPL3P   ribosomal protein L3 plastid 
 gma-u.5   100794289   50S ribosomal protein L3-2, mitochondrial 
 gma-u.5   100775496   50S ribosomal protein L3-2, mitochondrial 
 vvi-u.5   100257955   large ribosomal subunit protein uL3m 
 ppo-u.5   18101736   50S ribosomal protein L3-2, mitochondrial 
 ppo-u.5   7477200   50S ribosomal protein L3-2, mitochondrial 
 mtr-u.5   25487658   50S ribosomal protein L3-2, mitochondrial 
 mtr-u.5   11424090   50S ribosomal protein L3-2, mitochondrial 
 mtr-u.5   11422949   50S ribosomal protein L3-2, mitochondrial 
 osa-u.5   4327104   large ribosomal subunit protein uL3m 
 zma-u.5   100191826   50S ribosomal protein L3, mitochondrial-like 

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Top 50 coexpressed genes to 102579491 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102579491 (sot-r.1 coexpression data)

CoexMap"102579491"


sotLOC102579491 | Entrez gene ID : 102579491      
Species sot sly ath gma vvi ppo mtr osa zma hvu bna cit bra ghi sbi bdi nta tae cre
Paralog 1 1 1 2 1 2 3 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sot03010 [list] [network] Ribosome (406 genes)
GO BP
GO:0006412 [list] [network] translation  (522 genes)  IEA  
GO CC
GO:0005762 [list] [network] mitochondrial large ribosomal subunit  (24 genes)  IEA  
GO:0005840 [list] [network] ribosome  (378 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (377 genes)  IEA  
Protein XP_006341388.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  cyto 1,  mito 1,  plas 1,  mito_plas 1,  cyto_plas 1  (predict for XP_006341388.1)
Subcellular
localization
TargetP
chlo 4  (predict for XP_006341388.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102579491
sly-u.5
for
101262501
ath-u.5
for
RPL3P
gma-u.5
for
100794289
gma-u.5
for
100775496
vvi-u.5
for
100257955
ppo-u.5
for
18101736
ppo-u.5
for
7477200
mtr-u.5
for
25487658
mtr-u.5
for
11424090
mtr-u.5
for
11422949
osa-u.5
for
4327104
zma-u.5
for
100191826


Ortholog ID: 5742
Species sot sot sly nta nta ath gma gma bra bra vvi ppo ppo mtr mtr ghi ghi bna bna cit osa zma tae tae hvu sbi cre
Symbol LOC102579491 LOC102580539 LOC101262501 LOC107830586 LOC107831882 RPL3P LOC100775496 LOC100794289 LOC103839203 LOC103869683 LOC100257955 LOC7477200 LOC18101736 LOC25487658 LOC11424090 LOC107910520 LOC107951544 LOC111207170 LOC106411286 LOC102613999 LOC4327104 LOC100191826 LOC123069537 LOC123078023 LOC123443365 LOC8085797 CHLRE_01g022250v5
Function* 50S ribosomal protein L3-2, chloroplastic-like 50S ribosomal protein L3-2, chloroplastic-like large ribosomal subunit protein uL3m large ribosomal subunit protein uL3m large ribosomal subunit protein uL3m ribosomal protein L3 plastid 50S ribosomal protein L3-2, mitochondrial 50S ribosomal protein L3-2, mitochondrial 50S ribosomal protein L3-2, mitochondrial 50S ribosomal protein L3-2, mitochondrial large ribosomal subunit protein uL3m 50S ribosomal protein L3-2, mitochondrial 50S ribosomal protein L3-2, mitochondrial 50S ribosomal protein L3-2, mitochondrial 50S ribosomal protein L3-2, mitochondrial 50S ribosomal protein L3-2, mitochondrial 50S ribosomal protein L3-2, mitochondrial 50S ribosomal protein L3-2, mitochondrial 50S ribosomal protein L3-2, mitochondrial-like 50S ribosomal protein L3-2, mitochondrial large ribosomal subunit protein uL3m 50S ribosomal protein L3, mitochondrial-like 50S ribosomal protein L3-2, mitochondrial 50S ribosomal protein L3-2, mitochondrial 50S ribosomal protein L3-2, mitochondrial 50S ribosomal protein L3-2, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly03013 Nucleocytoplasmic transport 2
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta03060 Protein export 2
nta03030 DNA replication 2
nta03410 Base excision repair 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 4
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
gma03010 Ribosome 3
gma03040 Spliceosome 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
gma03010 Ribosome 3
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
bra03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
bra03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 10
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 13
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
ghi04626 Plant-pathogen interaction 2
ghi03030 DNA replication 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi04626 Plant-pathogen interaction 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 5
cit03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 5
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 8
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102579491 102580539 101262501 107830586 107831882 821011 100775496 100794289 103839203 103869683 100257955 7477200 18101736 25487658 11424090 107910520 107951544 111207170 106411286 102613999 4327104 100191826 123069537 123078023 123443365 8085797 5715221
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