ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	125609012	50S ribosomal protein L3-2, mitochondrial-like
bna-r.1	111207170	50S ribosomal protein L3-2, mitochondrial
bna-r.1	106452105	50S ribosomal protein L3-2, mitochondrial
bna-r.1	106411286	50S ribosomal protein L3-2, mitochondrial-like
bra-r.6	103869683	50S ribosomal protein L3-2, mitochondrial
bra-r.6	103839203	50S ribosomal protein L3-2, mitochondrial
ath-u.5	RPL3P	ribosomal protein L3 plastid
ghi-r.1	107910520	50S ribosomal protein L3-2, mitochondrial
ghi-r.1	107951544	50S ribosomal protein L3-2, mitochondrial
cit-r.1	102613999	50S ribosomal protein L3-2, mitochondrial
gma-u.5	100794289	50S ribosomal protein L3-2, mitochondrial
gma-u.5	100775496	50S ribosomal protein L3-2, mitochondrial
vvi-u.5	100257955	large ribosomal subunit protein uL3m
ppo-u.5	7477200	50S ribosomal protein L3-2, mitochondrial
ppo-u.5	18101736	50S ribosomal protein L3-2, mitochondrial
mtr-u.5	25487658	50S ribosomal protein L3-2, mitochondrial
mtr-u.5	11422949	50S ribosomal protein L3-2, mitochondrial
mtr-u.5	11424090	50S ribosomal protein L3-2, mitochondrial
sly-u.5	101262501	large ribosomal subunit protein uL3m
sot-r.1	102579491	50S ribosomal protein L3-2, chloroplastic-like
sot-r.1	102580539	50S ribosomal protein L3-2, chloroplastic-like
nta-r.1	107761018	large ribosomal subunit protein uL3m-like
nta-r.1	107825812	large ribosomal subunit protein uL3m
nta-r.1	107831882	large ribosomal subunit protein uL3m
osa-u.5	4327104	large ribosomal subunit protein uL3m
zma-u.5	100191826	50S ribosomal protein L3, mitochondrial-like
tae-r.2	123060880	50S ribosomal protein L3-2, mitochondrial
tae-r.2	123069537	50S ribosomal protein L3-2, mitochondrial
tae-r.2	123078023	50S ribosomal protein L3-2, mitochondrial
hvu-r.1	123443365	50S ribosomal protein L3-2, mitochondrial
sbi-r.1	8085797	50S ribosomal protein L3-2, chloroplastic
cre-r.1	CHLRE_01g022250v5	uncharacterized protein

Top 50 coexpressed genes to 125609012 (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 125609012 (bna-r.1 coexpression data)

CoexMap"125609012"

[Cytoscape]

Annotation

functional annotation

KEGG

bna03010 [list] [network] Ribosome (7497 genes)

GO BP

GO:0006412 [list] [network] translation

(1842 genes)

IEA

GO CC

GO:0005762 [list] [network] mitochondrial large ribosomal subunit	(79 genes)	IEA
GO:0005840 [list] [network] ribosome	(1367 genes)	IEA

GO MF

GO:0003735 [list] [network] structural constituent of ribosome

(1340 genes)

IEA

Protein

XP_048635662.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 7, chlo_mito 5, mito 2, cyto_mito 1

(predict for XP_048635662.1)

Subcellular
localization
TargetP

mito 7, chlo 4

(predict for XP_048635662.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 125609012	bna-r.1 for 111207170	bna-r.1 for 106452105	bna-r.1 for 106411286	bra-r.6 for 103869683	bra-r.6 for 103839203	ath-u.5 for RPL3P	ghi-r.1 for 107910520	ghi-r.1 for 107951544	cit-r.1 for 102613999	gma-u.5 for 100794289	gma-u.5 for 100775496	vvi-u.5 for 100257955	ppo-u.5 for 7477200	ppo-u.5 for 18101736	mtr-u.5 for 25487658	mtr-u.5 for 11422949	mtr-u.5 for 11424090	sly-u.5 for 101262501	sot-r.1 for 102579491	sot-r.1 for 102580539	nta-r.1 for 107761018	nta-r.1 for 107825812	nta-r.1 for 107831882	osa-u.5 for 4327104	zma-u.5 for 100191826	tae-r.2 for 123060880	tae-r.2 for 123069537	tae-r.2 for 123078023	hvu-r.1 for 123443365	sbi-r.1 for 8085797	cre-r.1 for CHLRE_01g022250v5

Ortholog

Ortholog ID: 5742

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

cre

Symbol

RPL3P

Function^*

50S ribosomal protein L3-2, mitochondrial-like