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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107922777   transcription factor EGL1 
 ghi-r.1   107911518   transcription factor GLABRA 3 
 ghi-r.1   107922841   transcription factor GLABRA 3 
 ghi-r.1   107904486   transcription factor EGL1-like 
 ath-u.5   GL3   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-u.5   EGL3   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 bra-r.6   EGL3   transcription factor EGL1 
 bra-r.6   103864070   transcription factor GLABRA 3 
 bra-r.6   103838089   transcription factor EGL1 
 bna-r.1   106366513   transcription factor EGL1 
 bna-r.1   106390918   transcription factor EGL1-like 
 bna-r.1   106392188   transcription factor EGL1 
 cit-r.1   102624378   transcription factor EGL1 
 cit-r.1   102606766   transcription factor GLABRA 3-like 
 cit-r.1   127901489   transcription factor EGL1-like 
 gma-u.5   100795524   transcription factor EGL1 
 gma-u.5   100798122   transcription factor EGL1 
 gma-u.5   100808167   transcription factor EGL1 
 vvi-u.5   MYCA1   myc anthocyanin regulatory protein 
 vvi-u.5   100258234   transcription factor EGL1 
 ppo-u.5   7461769   transcription factor EGL1 
 ppo-u.5   7465866   transcription factor EGL1 
 ppo-u.5   7479311   transcription factor GLABRA 3 
 mtr-u.5   25502049   transcription factor EGL1 
 sly-u.5   JAF13   bHLH-type transcription factor JAF13 
 sot-r.1   JAF13   transcription factor GLABRA 3-like 
 nta-r.1   107826976   transcription factor EGL1-like 
 nta-r.1   107764381   transcription factor EGL1-like 
 osa-u.5   4323849   anthocyanin regulatory R-S protein 
 zma-u.5   103646088   uncharacterized LOC103646088 
 zma-u.5   R-S   seed color component at R1 

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Top 50 coexpressed genes to 107922777 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107922777 (ghi-r.1 coexpression data)

CoexMap"107922777"


ghiLOC107922777 | Entrez gene ID : 107922777    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma bdi tae sbi cre hvu
Paralog 4 2 3 3 3 3 2 3 1 1 1 2 1 2 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0046983 [list] [network] protein dimerization activity  (1206 genes)  IEA  
Protein XP_016708432.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 1,  cysk 1  (predict for XP_016708432.2)
Subcellular
localization
TargetP
mito 5,  other 5  (predict for XP_016708432.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107922777
ghi-r.1
for
107911518
ghi-r.1
for
107922841
ghi-r.1
for
107904486
ath-u.5
for
GL3
ath-u.5
for
EGL3
bra-r.6
for
EGL3
bra-r.6
for
103864070
bra-r.6
for
103838089
bna-r.1
for
106366513
bna-r.1
for
106390918
bna-r.1
for
106392188
cit-r.1
for
102624378
cit-r.1
for
102606766
cit-r.1
for
127901489
gma-u.5
for
100795524
gma-u.5
for
100798122
gma-u.5
for
100808167
vvi-u.5
for
MYCA1
vvi-u.5
for
100258234
ppo-u.5
for
7461769
ppo-u.5
for
7465866
ppo-u.5
for
7479311
mtr-u.5
for
25502049
sly-u.5
for
JAF13
sot-r.1
for
JAF13
nta-r.1
for
107826976
nta-r.1
for
107764381
osa-u.5
for
4323849
zma-u.5
for
103646088
zma-u.5
for
R-S


Ortholog ID: 2357
Species ghi ghi ghi ath ath bra bra bra bna bna bna cit cit cit gma gma gma vvi vvi ppo ppo ppo mtr sly sot nta nta osa zma zma sbi
Symbol LOC107922777 LOC107911518 LOC107922841 GL3 EGL3 EGL3 LOC103864070 LOC103838089 LOC106366513 LOC106392188 LOC106424835 LOC102624378 LOC102606766 LOC127901489 LOC100795524 LOC100798122 LOC100783746 MYCA1 LOC100258234 LOC7461769 LOC7465866 LOC7479311 LOC25502049 JAF13 JAF13 LOC107826976 LOC107764381 LOC4323849 LOC103646088 R-S LOC8056590
Function* transcription factor EGL1 transcription factor GLABRA 3 transcription factor GLABRA 3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor EGL1 transcription factor GLABRA 3 transcription factor EGL1 transcription factor EGL1 transcription factor EGL1 transcription factor EGL1 transcription factor EGL1 transcription factor GLABRA 3-like transcription factor EGL1-like transcription factor EGL1 transcription factor EGL1 transcription factor EGL1 myc anthocyanin regulatory protein transcription factor EGL1 transcription factor EGL1 transcription factor EGL1 transcription factor GLABRA 3 transcription factor EGL1 bHLH-type transcription factor JAF13 transcription factor GLABRA 3-like transcription factor EGL1-like transcription factor EGL1-like anthocyanin regulatory R-S protein uncharacterized LOC103646088 seed color component at R1 anthocyanin regulatory R-S protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00941 Flavonoid biosynthesis 5
gma00562 Inositol phosphate metabolism 2
gma04070 Phosphatidylinositol signaling system 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00330 Arginine and proline metabolism 2
ppo00360 Phenylalanine metabolism 2
ppo00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 3
mtr04075 Plant hormone signal transduction 3
mtr04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03020 RNA polymerase 3
osa03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00941 Flavonoid biosynthesis 7
zma04712 Circadian rhythm - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107922777 107911518 107922841 834133 842669 103838261 103864070 103838089 106366513 106392188 106424835 102624378 102606766 127901489 100795524 100798122 100783746 100233025 100258234 7461769 7465866 7479311 25502049 101256795 102597504 107826976 107764381 4323849 103646088 100126972 8056590
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