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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1  107926117  pentatricopeptide repeat-containing protein At5g56310 
 ath-u.5  AT5G56310  Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5  100808631  pentatricopeptide repeat-containing protein At5g56310 
 ppo-u.5  7463559  pentatricopeptide repeat-containing protein At5g56310 
 mtr-u.5  11421190  pentatricopeptide repeat-containing protein At5g56310 
 sly-u.5  101253313  pentatricopeptide repeat-containing protein At5g56310 
 zma-u.5  107275220  Pentatricopeptide repeat-containing protein 

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Top 50 coexpressed genes to 107926117 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107926117 (ghi-r.1 coexpression data)

CoexMap"107926117"


ghiLOC107926117 | Entrez gene ID : 107926117
Species ghi ath gma ppo mtr sly zma nta bna osa tae bdi sot bra sbi hvu cit vvi cre
Paralog 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (557 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (14879 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016712409.1 [sequence] [blastp]
XP_040931496.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  E.R. 3,  mito 1,  plas 1,  mito_plas 1,  cyto_E.R. 1  (predict for XP_016712409.1)
chlo 5,  E.R. 3,  mito 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for XP_040931496.1)
Subcellular
localization
TargetP
mito 7,  other 5  (predict for XP_016712409.1)
mito 7,  other 5  (predict for XP_040931496.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ghi-r.1
for
107926117

.

ath-u.5
for
AT5G56310

.

gma-u.5
for
100808631

.

ppo-u.5
for
7463559

.

mtr-u.5
for
11421190

.

sly-u.5
for
101253313

.

zma-u.5
for
107275220

.


Ortholog ID: 11002
Species ath gma sly zma bra ppo mtr ghi sot sot cit bdi nta nta
Symbol AT5G56310 LOC100808631 LOC101253313 LOC107275220 LOC103856938 LOC7463559 LOC11421190 LOC107926117 LOC102603895 LOC102602128 LOC102630594 LOC100843144 LOC107774246 LOC107793910
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g56310 pentatricopeptide repeat-containing protein At5g56310 Pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At5g56310 pentatricopeptide repeat-containing protein At5g56310 pentatricopeptide repeat-containing protein At5g56310 pentatricopeptide repeat-containing protein At5g56310 pentatricopeptide repeat-containing protein At5g56310-like pentatricopeptide repeat-containing protein At5g56310-like pentatricopeptide repeat-containing protein At5g56310 pentatricopeptide repeat-containing protein At5g56310 pentatricopeptide repeat-containing protein At5g56310-like pentatricopeptide repeat-containing protein At5g56310
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835730 100808631 101253313 107275220 103856938 7463559 11421190 107926117 102603895 102602128 102630594 100843144 107774246 107793910
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