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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7463559   pentatricopeptide repeat-containing protein At5g56310 
 ppo-r.4   7463559   pentatricopeptide repeat-containing protein At5g56310 
 ppo-m.4   7463559   pentatricopeptide repeat-containing protein At5g56310 
 gma-u.5   100808631   pentatricopeptide repeat-containing protein At5g56310 
 mtr-u.5   11421190   pentatricopeptide repeat-containing protein At5g56310 
 ath-u.5   AT5G56310   Pentatricopeptide repeat (PPR) superfamily protein 
 sly-u.5   101253313   pentatricopeptide repeat-containing protein At5g56310 
 zma-u.5   107275220   Pentatricopeptide repeat-containing protein 

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Top 50 coexpressed genes to 7463559 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7463559 (ppo-u.5 coexpression data)

CoexMap"7463559"


ppoLOC7463559 | Entrez gene ID : 7463559    
Species ppo gma mtr ath sly zma sbi nta bra osa cre cit vvi hvu bdi sot tae bna ghi
Paralog 3 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002303975.2 [sequence] [blastp]
XP_024453743.1 [sequence] [blastp]
XP_024453744.1 [sequence] [blastp]
XP_024453747.1 [sequence] [blastp]
XP_024453748.1 [sequence] [blastp]
XP_052307098.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  plas 1,  extr 1,  E.R. 1,  nucl_plas 1,  E.R._plas 1  (predict for XP_002303975.2)
chlo 7,  nucl 1,  plas 1,  extr 1,  E.R. 1,  nucl_plas 1,  E.R._plas 1  (predict for XP_024453743.1)
chlo 7,  nucl 1,  plas 1,  extr 1,  E.R. 1,  nucl_plas 1,  E.R._plas 1  (predict for XP_024453744.1)
chlo 7,  nucl 1,  plas 1,  extr 1,  E.R. 1,  nucl_plas 1,  E.R._plas 1  (predict for XP_024453747.1)
chlo 7,  nucl 1,  plas 1,  extr 1,  E.R. 1,  nucl_plas 1,  E.R._plas 1  (predict for XP_024453748.1)
chlo 7,  nucl 1,  plas 1,  extr 1,  E.R. 1,  nucl_plas 1,  E.R._plas 1  (predict for XP_052307098.1)
Subcellular
localization
TargetP
scret 8  (predict for XP_002303975.2)
scret 8  (predict for XP_024453743.1)
scret 8  (predict for XP_024453744.1)
scret 8  (predict for XP_024453747.1)
scret 8  (predict for XP_024453748.1)
scret 8  (predict for XP_052307098.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7463559

.
ppo-r.4
for
7463559

.
ppo-m.4
for
7463559

.
gma-u.5
for
100808631

.
mtr-u.5
for
11421190

.
ath-u.5
for
AT5G56310

.
sly-u.5
for
101253313

.
zma-u.5
for
107275220

.


Ortholog ID: 11002
Species ath gma sly zma bra ppo mtr ghi sot sot cit bdi nta nta
Symbol AT5G56310 LOC100808631 LOC101253313 LOC107275220 LOC103856938 LOC7463559 LOC11421190 LOC107926117 LOC102603895 LOC102602128 LOC102630594 LOC100843144 LOC107774246 LOC107793910
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g56310 pentatricopeptide repeat-containing protein At5g56310 Pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At5g56310 pentatricopeptide repeat-containing protein At5g56310 pentatricopeptide repeat-containing protein At5g56310 pentatricopeptide repeat-containing protein At5g56310 pentatricopeptide repeat-containing protein At5g56310-like pentatricopeptide repeat-containing protein At5g56310-like pentatricopeptide repeat-containing protein At5g56310 pentatricopeptide repeat-containing protein At5g56310 pentatricopeptide repeat-containing protein At5g56310-like pentatricopeptide repeat-containing protein At5g56310
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835730 100808631 101253313 107275220 103856938 7463559 11421190 107926117 102603895 102602128 102630594 100843144 107774246 107793910
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