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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107935837   protein AUXIN SIGNALING F-BOX 2 
 ath-u.5   AFB2   auxin signaling F-box 2 
 ath-u.5   AFB3   auxin signaling F-box 3 
 gma-u.5   100788040   protein AUXIN SIGNALING F-BOX 2 
 gma-u.5   100802672   protein AUXIN SIGNALING F-BOX 2 
 gma-u.5   AFB3A   auxin signaling F-box 3 protein 
 vvi-u.5   100263524   protein AUXIN SIGNALING F-BOX 2 
 ppo-u.5   7495822   protein AUXIN SIGNALING F-BOX 2 
 ppo-u.5   18107123   protein AUXIN SIGNALING F-BOX 2 
 mtr-u.5   11429111   protein AUXIN SIGNALING F-BOX 2 
 osa-u.5   4350590   transport inhibitor response 1-like protein Os11g0515500 
 osa-u.5   4335696   transport inhibitor response 1-like protein Os04g0395600 
 zma-u.5   100216731   Protein AUXIN SIGNALING F-BOX 3 
 zma-u.5   100278846   Protein AUXIN SIGNALING F-BOX 3 
 zma-u.5   100281739   transport inhibitor response 1 protein 

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Top 50 coexpressed genes to 107935837 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107935837 (ghi-r.1 coexpression data)

CoexMap"107935837"


ghiLOC107935837 | Entrez gene ID : 107935837    
Species ghi ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi sly sot nta cre tae
Paralog 1 2 3 1 2 1 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi04075 [list] [network] Plant hormone signal transduction (1215 genes)
GO BP
GO:0031146 [list] [network] SCF-dependent proteasomal ubiquitin-dependent protein catabolic process  (153 genes)  IEA  
GO CC
GO:0019005 [list] [network] SCF ubiquitin ligase complex  (155 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016723942.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto_nucl 4,  cyto 3,  chlo 3  (predict for XP_016723942.2)
Subcellular
localization
TargetP
other 8  (predict for XP_016723942.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107935837
ath-u.5
for
AFB2
ath-u.5
for
AFB3
gma-u.5
for
100788040
gma-u.5
for
100802672
gma-u.5
for
AFB3A
vvi-u.5
for
100263524
ppo-u.5
for
7495822
ppo-u.5
for
18107123
mtr-u.5
for
11429111
osa-u.5
for
4350590
osa-u.5
for
4335696
zma-u.5
for
100216731
zma-u.5
for
100278846
zma-u.5
for
100281739


Ortholog ID: 4247
Species ghi ghi ath ath bra bra bna bna cit gma gma vvi ppo ppo mtr nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi
Symbol LOC107911740 LOC107937113 AFB2 AFB3 LOC103843104 LOC103854290 LOC106412544 LOC106382373 LOC102616638 LOC100788040 LOC100802672 LOC100263524 LOC7495822 LOC18107123 LOC11429111 LOC107781894 LOC107789933 LOC4335696 LOC4350590 LOC100278846 LOC100281739 LOC123104279 LOC123189076 LOC123426568 LOC123399694 LOC8072008 LOC8083114 LOC100839342 LOC100822494
Function* protein AUXIN SIGNALING F-BOX 2 protein AUXIN SIGNALING F-BOX 2 auxin signaling F-box 2 auxin signaling F-box 3 protein AUXIN SIGNALING F-BOX 3 protein AUXIN SIGNALING F-BOX 2 protein AUXIN SIGNALING F-BOX 3 protein AUXIN SIGNALING F-BOX 3 protein AUXIN SIGNALING F-BOX 2 protein AUXIN SIGNALING F-BOX 2 protein AUXIN SIGNALING F-BOX 2 protein AUXIN SIGNALING F-BOX 2 protein AUXIN SIGNALING F-BOX 2 protein AUXIN SIGNALING F-BOX 2 protein AUXIN SIGNALING F-BOX 2 protein AUXIN SIGNALING F-BOX 2 protein AUXIN SIGNALING F-BOX 2 transport inhibitor response 1-like protein Os04g0395600 transport inhibitor response 1-like protein Os11g0515500 Protein AUXIN SIGNALING F-BOX 3 transport inhibitor response 1 protein transport inhibitor response 1-like protein Os11g0515500 transport inhibitor response 1-like protein Os04g0395600 transport inhibitor response 1-like protein Os04g0395600 transport inhibitor response 1-like protein Os11g0515500 transport inhibitor response 1-like protein Os04g0395600 transport inhibitor response 1-like protein Os11g0515500 transport inhibitor response 1-like protein Os11g0515500 transport inhibitor response 1-like protein Os04g0395600
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 4
ath04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 3
cit03015 mRNA surveillance pathway 2
cit04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
mtr04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
nta01240 Biosynthesis of cofactors 3
nta00561 Glycerolipid metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
nta01240 Biosynthesis of cofactors 3
nta02010 ABC transporters 2
nta04981 Folate transport and metabolism 2
nta00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
osa00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
tae00564 Glycerophospholipid metabolism 3
tae00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00310 Lysine degradation 3
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 2
sbi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107911740 107937113 822296 837838 103843104 103854290 106412544 106382373 102616638 100788040 100802672 100263524 7495822 18107123 11429111 107781894 107789933 4335696 4350590 100278846 100281739 123104279 123189076 123426568 123399694 8072008 8083114 100839342 100822494
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