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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107936460   protein DAMAGED DNA-BINDING 2 
 ghi-r.1   121212677   protein DAMAGED DNA-BINDING 2 
 ath-u.5   DDB2   damaged DNA binding 2 
 bna-r.1   106387387   protein DAMAGED DNA-BINDING 2 
 bna-r.1   106388037   protein DAMAGED DNA-BINDING 2 
 cit-r.1   102616830   protein DAMAGED DNA-BINDING 2 
 gma-u.5   100793506   protein DAMAGED DNA-BINDING 2 
 gma-u.5   100527914   protein DAMAGED DNA-BINDING 2 
 vvi-u.5   100250121   protein DAMAGED DNA-BINDING 2 
 ppo-u.5   7478534   protein DAMAGED DNA-BINDING 2 
 mtr-u.5   11405495   protein DAMAGED DNA-BINDING 2 
 sly-u.5   101265575   protein DAMAGED DNA-BINDING 2 
 sot-r.1   102582170   protein DAMAGED DNA-BINDING 2 
 nta-r.1   107759199   protein DAMAGED DNA-BINDING 2 
 nta-r.1   107760564   protein DAMAGED DNA-BINDING 2-like 
 osa-u.5   4325482   DNA damage-binding protein 2-like 
 zma-u.5   100381699   DNA damage-binding protein 2 
 tae-r.2   123068492   DNA damage-binding protein 2 
 tae-r.2   123060019   DNA damage-binding protein 2 
 tae-r.2   123076991   DNA damage-binding protein 2 
 hvu-r.1   123442607   DNA damage-binding protein 2 
 sbi-r.1   8060824   DNA damage-binding protein 2 
 bdi-r.1   100842647   DNA damage-binding protein 2 
 cre-r.1   CHLRE_13g577550v5   uncharacterized protein 

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Top 50 coexpressed genes to 107936460 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107936460 (ghi-r.1 coexpression data)

CoexMap"107936460"


ghiLOC107936460 | Entrez gene ID : 107936460    
Species ghi ath bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre bra
Paralog 2 1 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03420 [list] [network] Nucleotide excision repair (188 genes)
ghi04120 [list] [network] Ubiquitin mediated proteolysis (368 genes)
GO BP
GO:0009411 [list] [network] response to UV  (24 genes)  IEA  
GO:0006281 [list] [network] DNA repair  (557 genes)  IEA  
GO CC
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (59 genes)  IEA  
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0003684 [list] [network] damaged DNA binding  (72 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016724707.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  mito 3,  cyto 1,  cyto_mito 1,  mito_plas 1  (predict for XP_016724707.2)
Subcellular
localization
TargetP
other 7,  mito 4  (predict for XP_016724707.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107936460
ghi-r.1
for
121212677
ath-u.5
for
DDB2
bna-r.1
for
106387387
bna-r.1
for
106388037
cit-r.1
for
102616830
gma-u.5
for
100793506
gma-u.5
for
100527914
vvi-u.5
for
100250121
ppo-u.5
for
7478534
mtr-u.5
for
11405495
sly-u.5
for
101265575
sot-r.1
for
102582170
nta-r.1
for
107759199
nta-r.1
for
107760564
osa-u.5
for
4325482
zma-u.5
for
100381699
tae-r.2
for
123068492
tae-r.2
for
123060019
tae-r.2
for
123076991
hvu-r.1
for
123442607
sbi-r.1
for
8060824
bdi-r.1
for
100842647
cre-r.1
for
CHLRE_13g577550v5


Ortholog ID: 10409
Species ghi ghi ath bna bna cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC107936460 LOC121212677 DDB2 LOC106387387 LOC106388037 LOC102616830 LOC100793506 LOC100527914 LOC100250121 LOC7478534 LOC11405495 LOC101265575 LOC102582170 LOC107759199 LOC107760564 LOC4325482 LOC100381699 LOC123068492 LOC123060019 LOC123076991 LOC123442607 LOC8060824 LOC100842647 CHLRE_13g577550v5
Function* protein DAMAGED DNA-BINDING 2 protein DAMAGED DNA-BINDING 2 damaged DNA binding 2 protein DAMAGED DNA-BINDING 2 protein DAMAGED DNA-BINDING 2 protein DAMAGED DNA-BINDING 2 protein DAMAGED DNA-BINDING 2 protein DAMAGED DNA-BINDING 2 protein DAMAGED DNA-BINDING 2 protein DAMAGED DNA-BINDING 2 protein DAMAGED DNA-BINDING 2 protein DAMAGED DNA-BINDING 2 protein DAMAGED DNA-BINDING 2 protein DAMAGED DNA-BINDING 2 protein DAMAGED DNA-BINDING 2-like DNA damage-binding protein 2-like DNA damage-binding protein 2 DNA damage-binding protein 2 DNA damage-binding protein 2 DNA damage-binding protein 2 DNA damage-binding protein 2 DNA damage-binding protein 2 DNA damage-binding protein 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00760 Nicotinate and nicotinamide metabolism 4
ghi03420 Nucleotide excision repair 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00760 Nicotinate and nicotinamide metabolism 4
ghi03420 Nucleotide excision repair 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 4
bna03420 Nucleotide excision repair 2
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 4
bna03420 Nucleotide excision repair 2
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00750 Vitamin B6 metabolism 2
gma01240 Biosynthesis of cofactors 2
gma03420 Nucleotide excision repair 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03420 Nucleotide excision repair 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 3
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00941 Flavonoid biosynthesis 3
sot03018 RNA degradation 2
sot00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
nta00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03420 Nucleotide excision repair 3
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 4
tae03420 Nucleotide excision repair 3
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 3
tae03420 Nucleotide excision repair 3
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00650 Butanoate metabolism 2
hvu01200 Carbon metabolism 2
hvu01230 Biosynthesis of amino acids 2
hvu03015 mRNA surveillance pathway 2
hvu00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
sbi03083 Polycomb repressive complex 2
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00941 Flavonoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03410 Base excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107936460 121212677 835990 106387387 106388037 102616830 100793506 100527914 100250121 7478534 11405495 101265575 102582170 107759199 107760564 4325482 100381699 123068492 123060019 123076991 123442607 8060824 100842647 5719263
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