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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107951941   protein FAR-RED IMPAIRED RESPONSE 1 
 ath-u.5   FAR1   FRS (FAR1 Related Sequences) transcription factor family 
 gma-u.5   100814153   protein FAR-RED IMPAIRED RESPONSE 1 
 gma-u.5   100805377   protein FAR-RED IMPAIRED RESPONSE 1 
 gma-u.5   100792626   protein FAR-RED IMPAIRED RESPONSE 1 
 vvi-u.5   100262925   protein FAR-RED IMPAIRED RESPONSE 1 
 vvi-u.5   100251986   protein FAR-RED IMPAIRED RESPONSE 1 
 ppo-u.5   18097012   protein FAR-RED IMPAIRED RESPONSE 1 
 ppo-u.5   7495635   protein FAR-RED IMPAIRED RESPONSE 1 
 mtr-u.5   112416729   protein FAR-RED IMPAIRED RESPONSE 1 
 sly-u.5   101258392   protein FAR-RED IMPAIRED RESPONSE 1 
 sly-u.5   101248454   protein FAR-RED IMPAIRED RESPONSE 1 

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Top 50 coexpressed genes to 107951941 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107951941 (ghi-r.1 coexpression data)

CoexMap"107951941"


ghiLOC107951941 | Entrez gene ID : 107951941    
Species ghi ath gma vvi ppo mtr sly bdi hvu bra cit bna sbi osa sot nta cre tae zma
Paralog 1 1 3 2 2 1 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (4318 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (1753 genes)  IEA  
Protein XP_016742617.2 [sequence] [blastp]
XP_040956121.1 [sequence] [blastp]
XP_040956136.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  extr 2,  vacu 2  (predict for XP_016742617.2)
nucl 8,  cyto 1,  plas 1,  cysk 1,  cysk_plas 1,  cyto_plas 1  (predict for XP_040956121.1)
nucl 8,  cyto 1,  plas 1,  cysk 1,  cysk_plas 1,  cyto_plas 1  (predict for XP_040956136.1)
Subcellular
localization
TargetP
scret 6  (predict for XP_016742617.2)
mito 5,  other 5  (predict for XP_040956121.1)
mito 5,  other 5  (predict for XP_040956136.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107951941
ath-u.5
for
FAR1
gma-u.5
for
100814153
gma-u.5
for
100805377
gma-u.5
for
100792626
vvi-u.5
for
100262925
vvi-u.5
for
100251986
ppo-u.5
for
18097012
ppo-u.5
for
7495635
mtr-u.5
for
112416729
sly-u.5
for
101258392
sly-u.5
for
101248454


Ortholog ID: 9015
Species ghi ghi ath bra bna bna cit cit gma gma vvi vvi ppo ppo mtr sly sly sot sot nta nta
Symbol LOC107951941 LOC107922525 FAR1 LOC103871343 LOC106406253 LOC106411379 LOC102621332 LOC102625461 LOC100805377 LOC100792626 LOC100262925 LOC100251986 LOC18097012 LOC7495635 LOC112416729 LOC101258392 LOC101248454 LOC102595976 LOC102605725 LOC107826696 LOC107815231
Function* protein FAR-RED IMPAIRED RESPONSE 1 protein FAR-RED IMPAIRED RESPONSE 1 FRS (FAR1 Related Sequences) transcription factor family protein FAR-RED IMPAIRED RESPONSE 1 protein FAR-RED IMPAIRED RESPONSE 1 protein FAR-RED IMPAIRED RESPONSE 1 protein FAR1-RELATED SEQUENCE 1 protein FAR-RED IMPAIRED RESPONSE 1 protein FAR-RED IMPAIRED RESPONSE 1 protein FAR-RED IMPAIRED RESPONSE 1 protein FAR-RED IMPAIRED RESPONSE 1 protein FAR-RED IMPAIRED RESPONSE 1 protein FAR-RED IMPAIRED RESPONSE 1 protein FAR-RED IMPAIRED RESPONSE 1 protein FAR-RED IMPAIRED RESPONSE 1 protein FAR-RED IMPAIRED RESPONSE 1 protein FAR-RED IMPAIRED RESPONSE 1 protein FAR-RED IMPAIRED RESPONSE 1 protein FAR-RED IMPAIRED RESPONSE 1 protein FAR-RED IMPAIRED RESPONSE 1 protein FAR-RED IMPAIRED RESPONSE 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 4
ghi04070 Phosphatidylinositol signaling system 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 4
ghi04070 Phosphatidylinositol signaling system 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
bra00562 Inositol phosphate metabolism 2
bra04070 Phosphatidylinositol signaling system 2
bra03083 Polycomb repressive complex 2
bra03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00310 Lysine degradation 5
bna03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03250 Viral life cycle - HIV-1 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107951941 107922525 827173 103871343 106406253 106411379 102621332 102625461 100805377 100792626 100262925 100251986 18097012 7495635 112416729 101258392 101248454 102595976 102605725 107826696 107815231
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