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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107955072   uncharacterized LOC107955072 
 ghi-r.1   107955651   uncharacterized LOC107955651 
 ath-u.5   AT4G15420   Ubiquitin fusion degradation UFD1 family protein 
 bra-r.6   103833509   uncharacterized LOC103833509 
 bna-r.1   106372491   uncharacterized LOC106372491 
 bna-r.1   BNAA08G05670D   uncharacterized BNAA08G05670D 
 cit-r.1   107174239   uncharacterized LOC107174239 
 gma-u.5   100779441   uncharacterized LOC100779441 
 gma-u.5   100777384   uncharacterized LOC100777384 
 vvi-u.5   100246609   uncharacterized LOC100246609 
 ppo-u.5   7468516   uncharacterized LOC7468516 
 mtr-u.5   11435164   uncharacterized LOC11435164 
 sly-u.5   101248592   uncharacterized LOC101248592 
 sot-r.1   102602121   uncharacterized LOC102602121 
 nta-r.1   107813183   uncharacterized LOC107813183 
 nta-r.1   107786128   uncharacterized LOC107786128 
 osa-u.5   4326411   uncharacterized LOC4326411 
 zma-u.5   100191426   uncharacterized LOC100191426 
 tae-r.2   123132636   uncharacterized LOC123132636 
 tae-r.2   123078315   uncharacterized LOC123078315 
 tae-r.2   123078314   uncharacterized LOC123078314 
 hvu-r.1   123443656   uncharacterized LOC123443656 
 sbi-r.1   8075447   uncharacterized LOC8075447 
 bdi-r.1   100845492   uncharacterized LOC100845492 

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Top 50 coexpressed genes to 107955072 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107955072 (ghi-r.1 coexpression data)

CoexMap"107955072"


ghiLOC107955072 | Entrez gene ID : 107955072    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0034098 [list] [network] VCP-NPL4-UFD1 AAA ATPase complex  (16 genes)  IEA  
GO MF
GO:0031593 [list] [network] polyubiquitin modification-dependent protein binding  (65 genes)  IEA  
Protein XP_016746272.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_016746272.2)
Subcellular
localization
TargetP
other 8  (predict for XP_016746272.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107955072
ghi-r.1
for
107955651
ath-u.5
for
AT4G15420
bra-r.6
for
103833509
bna-r.1
for
106372491
bna-r.1
for
BNAA08G05670D
cit-r.1
for
107174239
gma-u.5
for
100779441
gma-u.5
for
100777384
vvi-u.5
for
100246609
ppo-u.5
for
7468516
mtr-u.5
for
11435164
sly-u.5
for
101248592
sot-r.1
for
102602121
nta-r.1
for
107813183
nta-r.1
for
107786128
osa-u.5
for
4326411
zma-u.5
for
100191426
tae-r.2
for
123132636
tae-r.2
for
123078315
tae-r.2
for
123078314
hvu-r.1
for
123443656
sbi-r.1
for
8075447
bdi-r.1
for
100845492


Ortholog ID: 9577
Species ghi ghi ath bra bna bna cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC107955072 LOC107955651 AT4G15420 LOC103833509 LOC106372491 BNAA08G05670D LOC107174239 LOC100779441 LOC100777384 LOC100246609 LOC7468516 LOC11435164 LOC101248592 LOC102602121 LOC107813183 LOC107786128 LOC4326411 LOC100191426 LOC123078315 LOC123078314 LOC123061259 LOC123443656 LOC8075447 LOC100845492
Function* uncharacterized LOC107955072 uncharacterized LOC107955651 Ubiquitin fusion degradation UFD1 family protein uncharacterized LOC103833509 uncharacterized LOC106372491 uncharacterized BNAA08G05670D uncharacterized LOC107174239 uncharacterized LOC100779441 uncharacterized LOC100777384 uncharacterized LOC100246609 uncharacterized LOC7468516 uncharacterized LOC11435164 uncharacterized LOC101248592 uncharacterized LOC102602121 uncharacterized LOC107813183 uncharacterized LOC107786128 uncharacterized LOC4326411 uncharacterized LOC100191426 uncharacterized LOC123078315 uncharacterized LOC123078314 uncharacterized LOC123061259 uncharacterized LOC123443656 uncharacterized LOC8075447 uncharacterized LOC100845492
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 3
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03250 Viral life cycle - HIV-1 3
bna03272 Virion - Hepatitis viruses 3
bna04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03250 Viral life cycle - HIV-1 3
bna03272 Virion - Hepatitis viruses 3
bna04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 8
gma03040 Spliceosome 3
gma04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 5
gma00740 Riboflavin metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 5
sot04141 Protein processing in endoplasmic reticulum 3
sot00020 Citrate cycle (TCA cycle) 2
sot01200 Carbon metabolism 2
sot01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107955072 107955651 827213 103833509 106372491 106360631 107174239 100779441 100777384 100246609 7468516 11435164 101248592 102602121 107813183 107786128 4326411 100191426 123078315 123078314 123061259 123443656 8075447 100845492
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