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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123132636   uncharacterized LOC123132636 
 osa-u.5   4326411   uncharacterized LOC4326411 
 zma-u.5   100191426   uncharacterized LOC100191426 
 ath-u.5   AT4G15420   Ubiquitin fusion degradation UFD1 family protein 
 gma-u.5   100779441   uncharacterized LOC100779441 
 gma-u.5   100777384   uncharacterized LOC100777384 
 sly-u.5   101248592   uncharacterized LOC101248592 
 vvi-u.5   100246609   uncharacterized LOC100246609 
 ppo-u.5   7468516   uncharacterized LOC7468516 
 mtr-u.5   11435164   uncharacterized LOC11435164 

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Top 50 coexpressed genes to 123132636 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123132636 (tae-r.2 coexpression data)

CoexMap"123132636"


taeLOC123132636 | Entrez gene ID : 123132636    
Species tae osa zma ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot bna ghi
Paralog 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0036503 [list] [network] ERAD pathway  (157 genes)  IEA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (881 genes)  IEA  
GO CC
GO:0034098 [list] [network] VCP-NPL4-UFD1 AAA ATPase complex  (50 genes)  IEA  
GO MF
GO:0031593 [list] [network] polyubiquitin modification-dependent protein binding  (104 genes)  IEA  
Protein XP_044408408.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1  (predict for XP_044408408.1)
Subcellular
localization
TargetP
other 6,  chlo 3  (predict for XP_044408408.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123132636

.
osa-u.5
for
4326411

.
zma-u.5
for
100191426

.
ath-u.5
for
AT4G15420

.
gma-u.5
for
100779441

.
gma-u.5
for
100777384

.
sly-u.5
for
101248592

.
vvi-u.5
for
100246609

.
ppo-u.5
for
7468516

.
mtr-u.5
for
11435164

.


Ortholog ID: 9577
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT4G15420 LOC100777384 LOC100779441 LOC101248592 LOC4326411 LOC100191426 LOC103833509 LOC100246609 LOC7468516 LOC11435164 LOC123061259 LOC123078314 LOC123443656 LOC107955072 LOC107955651 BNAA08G05670D LOC106372491 LOC8075447 LOC102602121 LOC107174239 LOC100845492 LOC107813183 LOC107786128
Function* Ubiquitin fusion degradation UFD1 family protein uncharacterized LOC100777384 uncharacterized LOC100779441 uncharacterized LOC101248592 uncharacterized LOC4326411 uncharacterized LOC100191426 uncharacterized LOC103833509 uncharacterized LOC100246609 uncharacterized LOC7468516 uncharacterized LOC11435164 uncharacterized LOC123061259 uncharacterized LOC123078314 uncharacterized LOC123443656 uncharacterized LOC107955072 uncharacterized LOC107955651 uncharacterized BNAA08G05670D uncharacterized LOC106372491 uncharacterized LOC8075447 uncharacterized LOC102602121 uncharacterized LOC107174239 uncharacterized LOC100845492 uncharacterized LOC107813183 uncharacterized LOC107786128
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 3
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 5
gma00740 Riboflavin metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 8
gma03040 Spliceosome 3
gma04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03250 Viral life cycle - HIV-1 3
bna03272 Virion - Hepatitis viruses 3
bna04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03250 Viral life cycle - HIV-1 3
bna03272 Virion - Hepatitis viruses 3
bna04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 5
sot04141 Protein processing in endoplasmic reticulum 3
sot00020 Citrate cycle (TCA cycle) 2
sot01200 Carbon metabolism 2
sot01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827213 100777384 100779441 101248592 4326411 100191426 103833509 100246609 7468516 11435164 123061259 123078314 123443656 107955072 107955651 106360631 106372491 8075447 102602121 107174239 100845492 107813183 107786128
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