ATTED-II : GeneCoexpression result

Species	Gene	Description
tae-r.2	123078314	uncharacterized LOC123078314
osa-u.5	4326411	uncharacterized LOC4326411
zma-u.5	100191426	uncharacterized LOC100191426
ath-u.5	AT4G15420	Ubiquitin fusion degradation UFD1 family protein
gma-u.5	100779441	uncharacterized LOC100779441
gma-u.5	100777384	uncharacterized LOC100777384
sly-u.5	101248592	uncharacterized LOC101248592
vvi-u.5	100246609	uncharacterized LOC100246609
ppo-u.5	7468516	uncharacterized LOC7468516
mtr-u.5	11435164	uncharacterized LOC11435164

functional annotation

KEGG

GO BP

GO:0036503 [list] [network] ERAD pathway	(157 genes)	IEA
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process	(881 genes)	IEA

GO CC

GO:0034098 [list] [network] VCP-NPL4-UFD1 AAA ATPase complex

(50 genes)

IEA

GO MF

GO:0031593 [list] [network] polyubiquitin modification-dependent protein binding

(104 genes)

IEA

Protein

XP_044356717.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 8, nucl 1

(predict for XP_044356717.1)

Subcellular
localization
TargetP

other 6, chlo 3

(predict for XP_044356717.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123078314	osa-u.5 for 4326411	zma-u.5 for 100191426	ath-u.5 for AT4G15420	gma-u.5 for 100779441	gma-u.5 for 100777384	sly-u.5 for 101248592	vvi-u.5 for 100246609	ppo-u.5 for 7468516	mtr-u.5 for 11435164

Ortholog ID: 9577

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC123061259

uncharacterized LOC123078314

uncharacterized LOC123443656

uncharacterized LOC100845492

uncharacterized LOC4326411

uncharacterized LOC100191426

uncharacterized LOC8075447

Ubiquitin fusion degradation UFD1 family protein

uncharacterized LOC100777384

uncharacterized LOC100779441

uncharacterized LOC101248592

uncharacterized LOC103833509

uncharacterized LOC100246609

uncharacterized LOC7468516

uncharacterized LOC11435164

uncharacterized LOC107955072

uncharacterized LOC107955651

uncharacterized BNAA08G05670D

uncharacterized LOC106372491

uncharacterized LOC102602121

uncharacterized LOC107174239

uncharacterized LOC107813183

uncharacterized LOC107786128

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04141	Protein processing in endoplasmic reticulum	3
hvu03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03050	Proteasome	3
ath04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	5
gma00740	Riboflavin metabolism	2
gma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	8
gma03040	Spliceosome	3
gma04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03050	Proteasome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	3
bra04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03250	Viral life cycle - HIV-1	3
bna03272	Virion - Hepatitis viruses	3
bna04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03250	Viral life cycle - HIV-1	3
bna03272	Virion - Hepatitis viruses	3
bna04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03050	Proteasome	5
sot04141	Protein processing in endoplasmic reticulum	3
sot00020	Citrate cycle (TCA cycle)	2
sot01200	Carbon metabolism	2
sot01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00500	Starch and sucrose metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

123061259

123078314

123443656

100845492

4326411

100191426

8075447

827213

100777384

100779441

101248592

103833509

100246609

7468516

11435164

107955072

107955651

106360631

106372491

102602121

107174239

107813183

107786128

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 123078314 (tae-r.2 coexpression data)

Top 50 enrichment test to 123078314 (tae-r.2 coexpression data)


Species	tae	osa	zma	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre
Paralog	1	1	1	1	2	1	1	1	1	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123078314 (tae-r.2 coexpression data)

Top 50 enrichment test to 123078314 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**