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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107957048   KH domain-containing protein At2g38610 
 ghi-r.1   107914513   KH domain-containing protein At2g38610 
 ghi-r.1   107942300   KH domain-containing protein At2g38610 
 ghi-r.1   107896839   KH domain-containing protein At2g38610 
 ath-u.5   AT2G38610   RNA-binding KH domain-containing protein 
 ath-u.5   AT3G08620   RNA-binding KH domain-containing protein 
 bra-r.6   103870608   KH domain-containing protein At3g08620 
 bra-r.6   103867089   KH domain-containing protein At2g38610 
 bra-r.6   103857794   KH domain-containing protein At2g38610 
 bna-r.1   106411398   KH domain-containing protein At2g38610 
 bna-r.1   106407465   KH domain-containing protein At2g38610 
 cit-r.1   102617293   KH domain-containing protein At3g08620 
 gma-u.5   100781151   KH domain-containing protein At2g38610 
 gma-u.5   100791899   KH domain-containing protein At2g38610 
 gma-u.5   100797384   KH domain-containing protein At2g38610 
 vvi-u.5   100263936   KH domain-containing protein At2g38610 
 vvi-u.5   100245080   KH domain-containing protein At3g08620 
 ppo-u.5   7464745   KH domain-containing protein At3g08620 
 ppo-u.5   7472492   KH domain-containing protein At2g38610 
 ppo-u.5   7498113   KH domain-containing protein At3g08620 
 mtr-u.5   11436419   KH domain-containing protein At2g38610 
 mtr-u.5   11437020   KH domain-containing protein At2g38610 
 sly-u.5   101259991   KH domain-containing protein At3g08620 
 sly-u.5   101268791   KH domain-containing protein At2g38610 
 sot-r.1   102589717   KH domain-containing protein At2g38610-like 
 sot-r.1   102590377   KH domain-containing protein At3g08620 
 nta-r.1   107828770   KH domain-containing protein At2g38610 
 nta-r.1   107804870   KH domain-containing protein At2g38610-like 
 nta-r.1   107779550   KH domain-containing protein At3g08620 
 osa-u.5   4342758   KH domain-containing protein SPIN1-like 
 osa-u.5   4334557   KH domain-containing protein SPIN1-like 
 zma-u.5   118471882   KH domain-containing protein SPIN1 
 zma-u.5   100283658   nucleic acid binding protein 
 zma-u.5   100282540   nucleic acid binding protein 
 tae-r.2   123105608   KH domain-containing protein SPIN1 
 tae-r.2   123123431   KH domain-containing protein SPIN1 
 tae-r.2   123113927   KH domain-containing protein SPIN1 
 hvu-r.1   123452955   KH domain-containing protein SPIN1 
 sbi-r.1   8057073   KH domain-containing protein SPIN1 
 sbi-r.1   8069125   KH domain-containing protein SPIN1 
 bdi-r.1   100842113   KH domain-containing protein SPIN1 
 bdi-r.1   100823908   KH domain-containing protein SPIN1 

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Top 50 coexpressed genes to 107957048 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107957048 (ghi-r.1 coexpression data)

CoexMap"107957048"


ghiLOC107957048 | Entrez gene ID : 107957048    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 2 1 3 2 3 2 2 2 3 2 3 3 1 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0048024 [list] [network] regulation of mRNA splicing, via spliceosome  (45 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (890 genes)  IEA  
Protein XP_016747966.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  chlo 4  (predict for XP_016747966.1)
Subcellular
localization
TargetP
chlo 4,  other 3  (predict for XP_016747966.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107957048
ghi-r.1
for
107914513
ghi-r.1
for
107942300
ghi-r.1
for
107896839
ath-u.5
for
AT2G38610
ath-u.5
for
AT3G08620
bra-r.6
for
103870608
bra-r.6
for
103867089
bra-r.6
for
103857794
bna-r.1
for
106411398
bna-r.1
for
106407465
cit-r.1
for
102617293
gma-u.5
for
100781151
gma-u.5
for
100791899
gma-u.5
for
100797384
vvi-u.5
for
100263936
vvi-u.5
for
100245080
ppo-u.5
for
7464745
ppo-u.5
for
7472492
ppo-u.5
for
7498113
mtr-u.5
for
11436419
mtr-u.5
for
11437020
sly-u.5
for
101259991
sly-u.5
for
101268791
sot-r.1
for
102589717
sot-r.1
for
102590377
nta-r.1
for
107828770
nta-r.1
for
107804870
nta-r.1
for
107779550
osa-u.5
for
4342758
osa-u.5
for
4334557
zma-u.5
for
118471882
zma-u.5
for
100283658
zma-u.5
for
100282540
tae-r.2
for
123105608
tae-r.2
for
123123431
tae-r.2
for
123113927
hvu-r.1
for
123452955
sbi-r.1
for
8057073
sbi-r.1
for
8069125
bdi-r.1
for
100842113
bdi-r.1
for
100823908


Ortholog ID: 3090
Species ghi ghi ghi ath ath bra bra bra bna bna bna cit gma gma gma vvi vvi ppo ppo ppo mtr mtr sly sly sot sot nta nta nta osa osa zma zma zma tae tae tae hvu sbi sbi bdi bdi
Symbol LOC107957048 LOC107914513 LOC107896839 AT2G38610 AT3G08620 LOC103870608 LOC103867089 LOC103857794 LOC106407465 LOC106452848 LOC106450962 LOC102617293 LOC100781151 LOC100791899 LOC100816420 LOC100263936 LOC100245080 LOC7464745 LOC7472492 LOC18100022 LOC11436419 LOC11437020 LOC101259991 LOC101268791 LOC102589717 LOC102590377 LOC107828770 LOC107804870 LOC107779550 LOC4342758 LOC4334557 LOC100283658 LOC100282540 LOC100272497 LOC123105608 LOC123123431 LOC123113927 LOC123452955 LOC8057073 LOC8069125 LOC100842113 LOC100823908
Function* KH domain-containing protein At2g38610 KH domain-containing protein At2g38610 KH domain-containing protein At2g38610 RNA-binding KH domain-containing protein RNA-binding KH domain-containing protein KH domain-containing protein At3g08620 KH domain-containing protein At2g38610 KH domain-containing protein At2g38610 KH domain-containing protein At2g38610 KH domain-containing protein At3g08620 KH domain-containing protein At2g38610 KH domain-containing protein At3g08620 KH domain-containing protein At2g38610 KH domain-containing protein At2g38610 KH domain-containing protein At2g38610 KH domain-containing protein At2g38610 KH domain-containing protein At3g08620 KH domain-containing protein At3g08620 KH domain-containing protein At2g38610 KH domain-containing protein At2g38610 KH domain-containing protein At2g38610 KH domain-containing protein At2g38610 KH domain-containing protein At3g08620 KH domain-containing protein At2g38610 KH domain-containing protein At2g38610-like KH domain-containing protein At3g08620 KH domain-containing protein At2g38610 KH domain-containing protein At2g38610-like KH domain-containing protein At3g08620 KH domain-containing protein SPIN1-like KH domain-containing protein SPIN1-like nucleic acid binding protein nucleic acid binding protein KH domain-containing protein SPIN1 KH domain-containing protein SPIN1 KH domain-containing protein SPIN1 KH domain-containing protein SPIN1 KH domain-containing protein SPIN1 KH domain-containing protein SPIN1 KH domain-containing protein SPIN1 KH domain-containing protein SPIN1 KH domain-containing protein SPIN1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 4
ghi04136 Autophagy - other 4
ghi04382 Cornified envelope formation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
ath03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 4
bna04382 Cornified envelope formation 4
bna03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
gma03010 Ribosome 3
gma00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 4
gma04141 Protein processing in endoplasmic reticulum 3
gma03060 Protein export 3
gma04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01250 Biosynthesis of nucleotide sugars 3
sly00620 Pyruvate metabolism 2
sly00630 Glyoxylate and dicarboxylate metabolism 2
sly01200 Carbon metabolism 2
sly04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
sly04120 Ubiquitin mediated proteolysis 2
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
nta04626 Plant-pathogen interaction 4
nta00514 Other types of O-glycan biosynthesis 2
nta00740 Riboflavin metabolism 2
nta00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00514 Other types of O-glycan biosynthesis 2
nta00740 Riboflavin metabolism 2
nta00790 Folate biosynthesis 2
nta01240 Biosynthesis of cofactors 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00514 Other types of O-glycan biosynthesis 2
nta00190 Oxidative phosphorylation 2
nta04142 Lysosome 2
nta04145 Phagosome 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 2
osa03015 mRNA surveillance pathway 2
osa04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 4
zma04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 4
sbi03013 Nucleocytoplasmic transport 4
sbi03015 mRNA surveillance pathway 2
sbi03040 Spliceosome 2
sbi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi03015 mRNA surveillance pathway 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107957048 107914513 107896839 818443 820009 103870608 103867089 103857794 106407465 106452848 106450962 102617293 100781151 100791899 100816420 100263936 100245080 7464745 7472492 18100022 11436419 11437020 101259991 101268791 102589717 102590377 107828770 107804870 107779550 4342758 4334557 100283658 100282540 100272497 123105608 123123431 123113927 123452955 8057073 8069125 100842113 100823908
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