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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11436419   KH domain-containing protein At2g38610 
 mtr-r.5   11436419   KH domain-containing protein At2g38610 
 mtr-m.5   11436419   KH domain-containing protein At2g38610 
 mtr-u.5   11437020   KH domain-containing protein At2g38610 
 gma-u.5   100816420   KH domain-containing protein At2g38610 
 gma-u.5   100797384   KH domain-containing protein At2g38610 
 gma-u.5   100791899   KH domain-containing protein At2g38610 
 ppo-u.5   7464745   KH domain-containing protein At3g08620 
 ppo-u.5   7472492   KH domain-containing protein At2g38610 
 ppo-u.5   7498113   KH domain-containing protein At3g08620 
 ath-u.5   AT2G38610   RNA-binding KH domain-containing protein 
 ath-u.5   AT3G08620   RNA-binding KH domain-containing protein 
 vvi-u.5   100245080   KH domain-containing protein At3g08620 
 vvi-u.5   100263936   KH domain-containing protein At2g38610 
 sly-u.5   101259991   KH domain-containing protein At3g08620 
 sly-u.5   101268791   KH domain-containing protein At2g38610 
 osa-u.5   4334557   KH domain-containing protein SPIN1-like 
 osa-u.5   4342758   KH domain-containing protein SPIN1-like 
 zma-u.5   100283658   nucleic acid binding protein 
 zma-u.5   100282540   nucleic acid binding protein 
 zma-u.5   100272497   KH domain-containing protein SPIN1 

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Top 50 coexpressed genes to 11436419 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11436419 (mtr-u.5 coexpression data)

CoexMap"11436419"


mtrLOC11436419 | Entrez gene ID : 11436419      
Species mtr gma ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 4 3 3 2 2 2 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0048024 [list] [network] regulation of mRNA splicing, via spliceosome  (15 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2707 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (294 genes)  IEA  
Protein XP_003623654.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 4  (predict for XP_003623654.1)
Subcellular
localization
TargetP
other 3  (predict for XP_003623654.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11436419
mtr-r.5
for
11436419
mtr-m.5
for
11436419
mtr-u.5
for
11437020
gma-u.5
for
100816420
gma-u.5
for
100797384
gma-u.5
for
100791899
ppo-u.5
for
7464745
ppo-u.5
for
7472492
ppo-u.5
for
7498113
ath-u.5
for
AT2G38610
ath-u.5
for
AT3G08620
vvi-u.5
for
100245080
vvi-u.5
for
100263936
sly-u.5
for
101259991
sly-u.5
for
101268791
osa-u.5
for
4334557
osa-u.5
for
4342758
zma-u.5
for
100283658
zma-u.5
for
100282540
zma-u.5
for
100272497


Ortholog ID: 3090
Species mtr mtr gma gma ppo ppo ath ath bra bra vvi vvi ghi ghi bna bna cit sly sly sot sot nta nta osa osa zma zma tae tae hvu sbi sbi bdi bdi
Symbol LOC11436419 LOC11437020 LOC100816420 LOC100791899 LOC7464745 LOC18100022 AT2G38610 AT3G08620 LOC103857794 LOC103870608 LOC100263936 LOC100245080 LOC107896839 LOC107914513 LOC106450962 LOC106407465 LOC102617293 LOC101268791 LOC101259991 LOC102589717 LOC102590377 LOC107828770 LOC107804870 LOC4334557 LOC4342758 LOC100283658 LOC100272497 LOC123105608 LOC123113927 LOC123452955 LOC8069125 LOC8057073 LOC100823908 LOC100842113
Function* KH domain-containing protein At2g38610 KH domain-containing protein At2g38610 KH domain-containing protein At2g38610 KH domain-containing protein At2g38610 KH domain-containing protein At3g08620 KH domain-containing protein At2g38610 RNA-binding KH domain-containing protein RNA-binding KH domain-containing protein KH domain-containing protein At2g38610 KH domain-containing protein At3g08620 KH domain-containing protein At2g38610 KH domain-containing protein At3g08620 KH domain-containing protein At2g38610 KH domain-containing protein At2g38610 KH domain-containing protein At2g38610 KH domain-containing protein At2g38610 KH domain-containing protein At3g08620 KH domain-containing protein At2g38610 KH domain-containing protein At3g08620 KH domain-containing protein At2g38610-like KH domain-containing protein At3g08620 KH domain-containing protein At2g38610 KH domain-containing protein At2g38610-like KH domain-containing protein SPIN1-like KH domain-containing protein SPIN1-like nucleic acid binding protein KH domain-containing protein SPIN1 KH domain-containing protein SPIN1 KH domain-containing protein SPIN1 KH domain-containing protein SPIN1 KH domain-containing protein SPIN1 KH domain-containing protein SPIN1 KH domain-containing protein SPIN1 KH domain-containing protein SPIN1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 4
gma04141 Protein processing in endoplasmic reticulum 3
gma03060 Protein export 3
gma04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
ath03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
sly04120 Ubiquitin mediated proteolysis 2
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01250 Biosynthesis of nucleotide sugars 3
sly00620 Pyruvate metabolism 2
sly00630 Glyoxylate and dicarboxylate metabolism 2
sly01200 Carbon metabolism 2
sly04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
nta04626 Plant-pathogen interaction 4
nta00514 Other types of O-glycan biosynthesis 2
nta00740 Riboflavin metabolism 2
nta00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00514 Other types of O-glycan biosynthesis 2
nta00740 Riboflavin metabolism 2
nta00790 Folate biosynthesis 2
nta01240 Biosynthesis of cofactors 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 2
osa03015 mRNA surveillance pathway 2
osa04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 4
zma04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi03015 mRNA surveillance pathway 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 4
sbi03013 Nucleocytoplasmic transport 4
sbi03015 mRNA surveillance pathway 2
sbi03040 Spliceosome 2
sbi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11436419 11437020 100816420 100791899 7464745 18100022 818443 820009 103857794 103870608 100263936 100245080 107896839 107914513 106450962 106407465 102617293 101268791 101259991 102589717 102590377 107828770 107804870 4334557 4342758 100283658 100272497 123105608 123113927 123452955 8069125 8057073 100823908 100842113
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