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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107957264   COP9 signalosome complex subunit 1 
 ghi-r.1   121224114   COP9 signalosome complex subunit 1 
 ghi-r.1   107945645   COP9 signalosome complex subunit 1 
 ghi-r.1   107911953   COP9 signalosome complex subunit 1 
 ath-u.5   FUS6   COP9 signalosome complex subunit 1 
 bra-r.6   103841938   COP9 signalosome complex subunit 1 
 bra-r.6   103830283   COP9 signalosome complex subunit 1 
 bna-r.1   106452600   COP9 signalosome complex subunit 1 
 bna-r.1   106416070   COP9 signalosome complex subunit 1 
 bna-r.1   106415806   COP9 signalosome complex subunit 1 
 cit-r.1   127901371   COP9 signalosome complex subunit 1-like 
 cit-r.1   102627033   COP9 signalosome complex subunit 1 
 gma-u.5   100812958   COP9 signalosome complex subunit 1 
 gma-u.5   100782579   COP9 signalosome complex subunit 1 
 vvi-u.5   100250638   COP9 signalosome complex subunit 1 
 ppo-u.5   7494044   COP9 signalosome complex subunit 1 
 ppo-u.5   7464893   COP9 signalosome complex subunit 1 
 mtr-u.5   25502321   COP9 signalosome complex subunit 1 
 mtr-u.5   11435873   COP9 signalosome complex subunit 1 
 sly-u.5   101259078   COP9 signalosome complex subunit 1 
 sot-r.1   102588514   COP9 signalosome complex subunit 1 
 nta-r.1   107774179   COP9 signalosome complex subunit 1 
 nta-r.1   107788242   COP9 signalosome complex subunit 1 
 osa-u.5   4331403   COP9 signalosome complex subunit 1 
 zma-u.5   100283343   uncharacterized LOC100283343 
 tae-r.2   123049642   COP9 signalosome complex subunit 1 
 tae-r.2   123093836   COP9 signalosome complex subunit 1 
 tae-r.2   123099059   COP9 signalosome complex subunit 1 
 hvu-r.1   123434997   COP9 signalosome complex subunit 1-like 
 hvu-r.1   123449922   COP9 signalosome complex subunit 1-like 
 sbi-r.1   8077997   COP9 signalosome complex subunit 1 
 bdi-r.1   100837801   COP9 signalosome complex subunit 1 
 bdi-r.1   100824022   COP9 signalosome complex subunit 1 
 cre-r.1   CHLRE_05g234300v5   uncharacterized protein 

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Top 50 coexpressed genes to 107957264 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107957264 (ghi-r.1 coexpression data)

CoexMap"107957264"


ghiLOC107957264 | Entrez gene ID : 107957264    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 2 3 2 2 1 2 2 1 1 2 1 1 3 2 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0008180 [list] [network] COP9 signalosome  (38 genes)  IEA  
GO MF
Protein XP_016748233.2 [sequence] [blastp]
XP_016748234.2 [sequence] [blastp]
XP_016748235.2 [sequence] [blastp]
Subcellular
localization
wolf
cysk 4,  cyto 2,  cysk_plas 2,  nucl 1  (predict for XP_016748233.2)
cysk 6,  nucl 2,  cyto 1  (predict for XP_016748234.2)
cysk 6,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_016748235.2)
Subcellular
localization
TargetP
other 9  (predict for XP_016748233.2)
other 9  (predict for XP_016748234.2)
other 9  (predict for XP_016748235.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107957264
ghi-r.1
for
121224114
ghi-r.1
for
107945645
ghi-r.1
for
107911953
ath-u.5
for
FUS6
bra-r.6
for
103841938
bra-r.6
for
103830283
bna-r.1
for
106452600
bna-r.1
for
106416070
bna-r.1
for
106415806
cit-r.1
for
127901371
cit-r.1
for
102627033
gma-u.5
for
100812958
gma-u.5
for
100782579
vvi-u.5
for
100250638
ppo-u.5
for
7494044
ppo-u.5
for
7464893
mtr-u.5
for
25502321
mtr-u.5
for
11435873
sly-u.5
for
101259078
sot-r.1
for
102588514
nta-r.1
for
107774179
nta-r.1
for
107788242
osa-u.5
for
4331403
zma-u.5
for
100283343
tae-r.2
for
123049642
tae-r.2
for
123093836
tae-r.2
for
123099059
hvu-r.1
for
123434997
hvu-r.1
for
123449922
sbi-r.1
for
8077997
bdi-r.1
for
100837801
bdi-r.1
for
100824022
cre-r.1
for
CHLRE_05g234300v5


Ortholog ID: 4936
Species ghi ghi ghi ath bra bra bna bna bna cit cit gma gma vvi ppo ppo mtr mtr sly sot nta nta osa zma tae tae tae hvu hvu sbi bdi bdi cre
Symbol LOC107957264 LOC107945645 LOC107911953 FUS6 LOC103841938 LOC103830283 LOC106452600 LOC106415806 LOC106353259 LOC127901371 LOC102627033 LOC100812958 LOC100782579 LOC100250638 LOC7494044 LOC7464893 LOC25502321 LOC11435873 LOC101259078 LOC102588514 LOC107774179 LOC107788242 LOC4331403 LOC100283343 LOC123093836 LOC123123990 LOC123181375 LOC123434997 LOC123449922 LOC8077997 LOC100837801 LOC100824022 CHLRE_05g234300v5
Function* COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1-like COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 uncharacterized LOC100283343 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1-like COP9 signalosome complex subunit 1-like COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 9
bra04141 Protein processing in endoplasmic reticulum 4
bra03013 Nucleocytoplasmic transport 2
bra03015 mRNA surveillance pathway 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
bra03050 Proteasome 3
bra03013 Nucleocytoplasmic transport 3
bra03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 4
bna03420 Nucleotide excision repair 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 4
bna03420 Nucleotide excision repair 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 4
bna03420 Nucleotide excision repair 4
bna03015 mRNA surveillance pathway 2
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit04142 Lysosome 2
cit00510 N-Glycan biosynthesis 2
cit03015 mRNA surveillance pathway 2
cit04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit04142 Lysosome 2
cit00510 N-Glycan biosynthesis 2
cit03015 mRNA surveillance pathway 2
cit04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 4
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 6
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 8
vvi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 4
ppo00010 Glycolysis / Gluconeogenesis 3
ppo01200 Carbon metabolism 3
ppo01230 Biosynthesis of amino acids 2
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
mtr03040 Spliceosome 2
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 5
sly03013 Nucleocytoplasmic transport 3
sly03015 mRNA surveillance pathway 3
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00270 Cysteine and methionine metabolism 3
tae03008 Ribosome biogenesis in eukaryotes 3
tae03083 Polycomb repressive complex 3
tae04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae03040 Spliceosome 2
tae00280 Valine, leucine and isoleucine degradation 2
tae00410 beta-Alanine metabolism 2
tae00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae03083 Polycomb repressive complex 3
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 2
tae00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04146 Peroxisome 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
hvu03013 Nucleocytoplasmic transport 2
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi03015 mRNA surveillance pathway 2
sbi03040 Spliceosome 2
sbi03083 Polycomb repressive complex 2
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 4
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 12
cre04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107957264 107945645 107911953 825286 103841938 103830283 106452600 106415806 106353259 127901371 102627033 100812958 100782579 100250638 7494044 7464893 25502321 11435873 101259078 102588514 107774179 107788242 4331403 100283343 123093836 123123990 123181375 123434997 123449922 8077997 100837801 100824022 5727726
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