ATTED-II : GeneCoexpression result

Species	Gene	Description
osa-u.5	4331403	COP9 signalosome complex subunit 1
osa-r.6	4331403	COP9 signalosome complex subunit 1
osa-m.8	4331403	COP9 signalosome complex subunit 1
osa-e.1	4331403	COP9 signalosome complex subunit 1
zma-u.5	100283343	uncharacterized LOC100283343
ath-u.5	FUS6	COP9 signalosome complex subunit 1
gma-u.5	100812958	COP9 signalosome complex subunit 1
gma-u.5	100782579	COP9 signalosome complex subunit 1
sly-u.5	101259078	COP9 signalosome complex subunit 1
vvi-u.5	100250638	COP9 signalosome complex subunit 1
ppo-u.5	7494044	COP9 signalosome complex subunit 1
ppo-u.5	7464893	COP9 signalosome complex subunit 1
mtr-u.5	11435873	COP9 signalosome complex subunit 1
mtr-u.5	25502321	COP9 signalosome complex subunit 1

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0008180 [list] [network] COP9 signalosome

(11 genes)

IEA

GO MF

Protein

XP_015631614.1 [sequence] [blastp]

Subcellular
localization
wolf

cysk 4, cyto 4, nucl 1

(predict for XP_015631614.1)

Subcellular
localization
TargetP

other 5, chlo 4

(predict for XP_015631614.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 4331403	osa-r.6 for 4331403	osa-m.8 for 4331403	osa-e.1 for 4331403	zma-u.5 for 100283343	ath-u.5 for FUS6	gma-u.5 for 100812958	gma-u.5 for 100782579	sly-u.5 for 101259078	vvi-u.5 for 100250638	ppo-u.5 for 7494044	ppo-u.5 for 7464893	mtr-u.5 for 11435873	mtr-u.5 for 25502321

Ortholog

Ortholog ID: 4936

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

FUS6

Function^*

COP9 signalosome complex subunit 1

COP9 signalosome complex subunit 1-like

COP9 signalosome complex subunit 1

uncharacterized LOC100283343

COP9 signalosome complex subunit 1

COP9 signalosome complex subunit 1-like

COP9 signalosome complex subunit 1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03050	Proteasome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03018	RNA degradation	3
tae03040	Spliceosome	2
tae00280	Valine, leucine and isoleucine degradation	2
tae00410	beta-Alanine metabolism	2
tae00640	Propanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03082	ATP-dependent chromatin remodeling	3
tae03083	Polycomb repressive complex	3
tae03013	Nucleocytoplasmic transport	3
tae03015	mRNA surveillance pathway	2
tae00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	4
hvu03013	Nucleocytoplasmic transport	2
hvu04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04146	Peroxisome	2
hvu04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04712	Circadian rhythm - plant	4
bdi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03013	Nucleocytoplasmic transport	2
sbi03015	mRNA surveillance pathway	2
sbi03040	Spliceosome	2
sbi03083	Polycomb repressive complex	2
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03050	Proteasome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03050	Proteasome	4
gma03013	Nucleocytoplasmic transport	2
gma03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03050	Proteasome	6
gma03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03050	Proteasome	5
sly03013	Nucleocytoplasmic transport	3
sly03015	mRNA surveillance pathway	3
sly03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	4
bra03050	Proteasome	3
bra03013	Nucleocytoplasmic transport	3
bra03015	mRNA surveillance pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03050	Proteasome	8
vvi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	4
ppo00010	Glycolysis / Gluconeogenesis	3
ppo01200	Carbon metabolism	3
ppo01230	Biosynthesis of amino acids	2
ppo03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03082	ATP-dependent chromatin remodeling	2
mtr03040	Spliceosome	2
mtr03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03022	Basal transcription factors	4
bna03420	Nucleotide excision repair	4
bna03015	mRNA surveillance pathway	2
bna03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03022	Basal transcription factors	4
bna03420	Nucleotide excision repair	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03050	Proteasome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	3
cit04142	Lysosome	2
cit00510	N-Glycan biosynthesis	2
cit03015	mRNA surveillance pathway	2
cit04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	3
cit04142	Lysosome	2
cit00510	N-Glycan biosynthesis	2
cit03015	mRNA surveillance pathway	2
cit04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03013	Nucleocytoplasmic transport	2
nta03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	3
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03050	Proteasome	12
cre04120	Ubiquitin mediated proteolysis	2

Expression

Expression pattern

Entrez Gene ID^*

4331403

123123990

123181375

123449922

123434997

100837801

100824022

100283343

8077997

825286

100812958

100782579

101259078

103830283

100250638

7494044

7464893

11435873

25502321

107957264

107911953

106353259

106452600

102588514

127901371

102627033

107788242

107774179

5727726

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 4331403 (osa-u.5 coexpression data)

Top 50 enrichment test to 4331403 (osa-u.5 coexpression data)


Species	osa	zma	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	4	1	1	2	1	1	2	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4331403 (osa-u.5 coexpression data)

Top 50 enrichment test to 4331403 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**