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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107958029   60S ribosomal protein L35a-3 
 ghi-r.1   107919797   60S ribosomal protein L35a-1 
 ghi-r.1   107935464   60S ribosomal protein L35a-1 
 ghi-r.1   107939907   60S ribosomal protein L35a-3 
 ath-u.5   AT3G55750   Ribosomal protein L35Ae family protein 
 ath-u.5   AT1G07070   Ribosomal protein L35Ae family protein 
 ath-u.5   AT1G41880   Ribosomal protein L35Ae family protein 
 bra-r.6   103830708   60S ribosomal protein L35a-1 
 bra-r.6   103841484   60S ribosomal protein L35a-2 
 bna-r.1   106354376   60S ribosomal protein L35a-1 
 bna-r.1   106354340   60S ribosomal protein L35a-1 
 bna-r.1   106379472   60S ribosomal protein L35a-1 
 cit-r.1   102619537   60S ribosomal protein L35a-1 
 cit-r.1   102631168   60S ribosomal protein L35a-1 
 gma-u.5   100800463   60S ribosomal protein L35a-1-like 
 gma-u.5   100499746   uncharacterized LOC100499746 
 gma-u.5   100305997   uncharacterized LOC100305997 
 vvi-u.5   100258134   large ribosomal subunit protein eL33w 
 vvi-u.5   100242662   large ribosomal subunit protein eL33w 
 ppo-u.5   7458094   60S ribosomal protein L35a-1 
 ppo-u.5   7467564   60S ribosomal protein L35a-1 
 ppo-u.5   7490375   60S ribosomal protein L35a-1 
 mtr-u.5   120576892   60S ribosomal protein L35a-1 
 mtr-u.5   25481347   60S ribosomal protein L35a-1 
 sly-u.5   104647572   60S ribosomal protein L35a-3 
 sly-u.5   101265413   large ribosomal subunit protein eL33z 
 sot-r.1   102589364   60S ribosomal protein L35a-3-like 
 sot-r.1   102589687   60S ribosomal protein L35a-3 
 sot-r.1   102586281   60S ribosomal protein L35a-2 
 nta-r.1   107796252   large ribosomal subunit protein eL33y-like 
 nta-r.1   107768641   large ribosomal subunit protein eL33y 
 nta-r.1   107797707   large ribosomal subunit protein eL33y-like 
 osa-u.5   4339572   large ribosomal subunit protein eL33z 
 osa-u.5   4330946   large ribosomal subunit protein eL33w 
 osa-u.5   9271790   large ribosomal subunit protein eL33z 
 zma-u.5   100282547   60S ribosomal protein L35Ae-like 
 zma-u.5   100193672   60S ribosomal protein L35a-like 
 zma-u.5   100282164   60S ribosomal protein L35a-like 
 tae-r.2   123128675   60S ribosomal protein L35a-1 
 tae-r.2   123138742   60S ribosomal protein L35a-1 
 hvu-r.1   123407436   60S ribosomal protein L35a-1-like 
 hvu-r.1   123404003   60S ribosomal protein L35a-1-like 
 hvu-r.1   123449679   60S ribosomal protein L35a-1-like 
 sbi-r.1   8055565   60S ribosomal protein L35a-1 
 sbi-r.1   8063563   60S ribosomal protein L35a-1 
 sbi-r.1   8065446   60S ribosomal protein L35a-1 
 bdi-r.1   100843853   60S ribosomal protein L35a-1 
 bdi-r.1   100832242   60S ribosomal protein L35a-1 
 bdi-r.1   100826139   60S ribosomal protein L35a-1 
 cre-r.1   CHLRE_10g459250v5   ribosomal protein L35a 

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Top 50 coexpressed genes to 107958029 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107958029 (ghi-r.1 coexpression data)

CoexMap"107958029"


ghiLOC107958029 | Entrez gene ID : 107958029    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 2 3 2 3 2 3 2 2 3 3 3 3 2 3 3 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03010 [list] [network] Ribosome (2429 genes)
GO BP
GO:0002181 [list] [network] cytoplasmic translation  (214 genes)  IEA  
GO:0042273 [list] [network] ribosomal large subunit biogenesis  (235 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (467 genes)  IEA  
GO:0005840 [list] [network] ribosome  (1110 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (1075 genes)  IEA  
Protein XP_016749169.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 8,  nucl 1  (predict for XP_016749169.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_016749169.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107958029
ghi-r.1
for
107919797
ghi-r.1
for
107935464
ghi-r.1
for
107939907
ath-u.5
for
AT3G55750
ath-u.5
for
AT1G07070
ath-u.5
for
AT1G41880
bra-r.6
for
103830708
bra-r.6
for
103841484
bna-r.1
for
106354376
bna-r.1
for
106354340
bna-r.1
for
106379472
cit-r.1
for
102619537
cit-r.1
for
102631168
gma-u.5
for
100800463
gma-u.5
for
100499746
gma-u.5
for
100305997
vvi-u.5
for
100258134
vvi-u.5
for
100242662
ppo-u.5
for
7458094
ppo-u.5
for
7467564
ppo-u.5
for
7490375
mtr-u.5
for
120576892
mtr-u.5
for
25481347
sly-u.5
for
104647572
sly-u.5
for
101265413
sot-r.1
for
102589364
sot-r.1
for
102589687
sot-r.1
for
102586281
nta-r.1
for
107796252
nta-r.1
for
107768641
nta-r.1
for
107797707
osa-u.5
for
4339572
osa-u.5
for
4330946
osa-u.5
for
9271790
zma-u.5
for
100282547
zma-u.5
for
100193672
zma-u.5
for
100282164
tae-r.2
for
123128675
tae-r.2
for
123138742
hvu-r.1
for
123407436
hvu-r.1
for
123404003
hvu-r.1
for
123449679
sbi-r.1
for
8055565
sbi-r.1
for
8063563
sbi-r.1
for
8065446
bdi-r.1
for
100843853
bdi-r.1
for
100832242
bdi-r.1
for
100826139
cre-r.1
for
CHLRE_10g459250v5


Ortholog ID: 1086
Species ghi ghi ghi ath ath ath bra bna bna bna cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi cre
Symbol LOC107958029 LOC107939907 LOC107900454 AT3G55750 AT1G07070 AT1G41880 LOC103831899 LOC106402672 LOC106414973 LOC106445376 LOC102619537 LOC102631168 LOC100499746 LOC100305997 LOC100305958 LOC100258134 LOC100242662 LOC7458094 LOC7467564 LOC7494468 LOC120576892 LOC25494894 LOC104647572 LOC101265413 LOC102589364 LOC102586281 LOC102595077 LOC107796252 LOC107768641 LOC107799355 LOC4339572 LOC4330946 LOC9271790 LOC100193672 LOC100282164 LOC100281989 LOC123165709 LOC123156783 LOC123148862 LOC123407436 LOC123404003 LOC123449679 LOC8055565 LOC8063563 LOC8081956 LOC100843853 LOC100826139 LOC100846452 CHLRE_10g459250v5
Function* 60S ribosomal protein L35a-3 60S ribosomal protein L35a-3 60S ribosomal protein L35a-1 Ribosomal protein L35Ae family protein Ribosomal protein L35Ae family protein Ribosomal protein L35Ae family protein 60S ribosomal protein L35a-1 60S ribosomal protein L35a-1 60S ribosomal protein L35a-2-like 60S ribosomal protein L35a-1-like 60S ribosomal protein L35a-1 60S ribosomal protein L35a-1 uncharacterized LOC100499746 uncharacterized LOC100305997 uncharacterized LOC100305958 large ribosomal subunit protein eL33w large ribosomal subunit protein eL33w 60S ribosomal protein L35a-1 60S ribosomal protein L35a-1 60S ribosomal protein L35a-1 60S ribosomal protein L35a-1 60S ribosomal protein L35a-1 60S ribosomal protein L35a-3 large ribosomal subunit protein eL33z 60S ribosomal protein L35a-3-like 60S ribosomal protein L35a-2 60S ribosomal protein L35a-4-like large ribosomal subunit protein eL33y-like large ribosomal subunit protein eL33y large ribosomal subunit protein eL33y large ribosomal subunit protein eL33z large ribosomal subunit protein eL33w large ribosomal subunit protein eL33z 60S ribosomal protein L35a-like 60S ribosomal protein L35a-like 60S ribosomal protein L35a-like 60S ribosomal protein L35a-1 60S ribosomal protein L35a-1 60S ribosomal protein L35a-1 60S ribosomal protein L35a-1-like 60S ribosomal protein L35a-1-like 60S ribosomal protein L35a-1-like 60S ribosomal protein L35a-1 60S ribosomal protein L35a-1 60S ribosomal protein L35a-1 60S ribosomal protein L35a-1 60S ribosomal protein L35a-1 60S ribosomal protein L35a-1 ribosomal protein L35a
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 15
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 14
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 14
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 8
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 14
nta03018 RNA degradation 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 13
nta03018 RNA degradation 3
nta03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 18
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 14
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 18
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 11
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 13
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 19
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 20
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 21
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 12
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 17
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107958029 107939907 107900454 824741 837218 840799 103831899 106402672 106414973 106445376 102619537 102631168 100499746 100305997 100305958 100258134 100242662 7458094 7467564 7494468 120576892 25494894 104647572 101265413 102589364 102586281 102595077 107796252 107768641 107799355 4339572 4330946 9271790 100193672 100282164 100281989 123165709 123156783 123148862 123407436 123404003 123449679 8055565 8063563 8081956 100843853 100826139 100846452 5724135
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