ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	107958810	brassinosteroid-responsive RING protein 1
ath-u.5	AT3G43430	RING/U-box superfamily protein
ath-u.5	AT5G20885	RING/U-box superfamily protein
gma-u.5	111138523	RING/U-box superfamily protein
gma-u.5	100306203	RING/U-box superfamily protein
ppo-u.5	7492274	RING-H2 finger protein ATL38
mtr-u.5	11423860	RING-H2 finger protein ATL64

functional annotation

KEGG

GO BP

GO:0016567 [list] [network] protein ubiquitination

(962 genes)

IEA

GO CC

GO MF

GO:0061630 [list] [network] ubiquitin protein ligase activity

(513 genes)

IEA

Protein

XP_016750188.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 5, E.R. 2, nucl 1, E.R._vacu 1, cyto_E.R. 1

(predict for XP_016750188.1)

Subcellular
localization
TargetP

scret 4

(predict for XP_016750188.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107958810	ath-u.5 for AT3G43430	ath-u.5 for AT5G20885	gma-u.5 for 111138523	gma-u.5 for 100306203	ppo-u.5 for 7492274	mtr-u.5 for 11423860

Ortholog ID: 12202

Species

ghi

ath

bra

bna

cit

gma

ppo

mtr

Symbol

Function^*

brassinosteroid-responsive RING protein 1

probable E3 ubiquitin-protein ligase RHA1A

RING/U-box superfamily protein

E3 ubiquitin-protein ligase RHA1B

E3 ubiquitin-protein ligase RHA2B

brassinosteroid-responsive RING protein 1

brassinosteroid-responsive RING protein 1-like

brassinosteroid-responsive RING protein 1

RING/U-box superfamily protein

RING-H2 finger protein ATL38

RING-H2 finger protein ATL64

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00030	Pentose phosphate pathway	6
ghi00710	Carbon fixation by Calvin cycle	6
ghi01200	Carbon metabolism	6
ghi01230	Biosynthesis of amino acids	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01200	Carbon metabolism	4
ath00030	Pentose phosphate pathway	3
ath00480	Glutathione metabolism	3
ath00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00270	Cysteine and methionine metabolism	3
bra01230	Biosynthesis of amino acids	3
bra00670	One carbon pool by folate	2
bra00999	Biosynthesis of various plant secondary metabolites	2
bra01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00190	Oxidative phosphorylation	2
cit04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04626	Plant-pathogen interaction	4
mtr04016	MAPK signaling pathway - plant	2
mtr04070	Phosphatidylinositol signaling system	2
mtr04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

107958810

121204784

823423

832212

103845635

103856470

106385155

106425724

102630436

100306203

111138523

7492274

11423860


Species	ghi	ath	gma	ppo	mtr	bdi	hvu	bra	vvi	cit	bna	sbi	sly	osa	sot	nta	cre	tae	zma
Paralog	1	2	2	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107958810 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107958810 (ghi-r.1 coexpression data)

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107958810 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107958810 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**