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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107959356   60S ribosomal protein L10a 
 ghi-r.1   107959357   60S ribosomal protein L10a 
 ghi-r.1   107891520   60S ribosomal protein L10a 
 ghi-r.1   107941273   60S ribosomal protein L10a 
 ath-u.5   PGY1   Ribosomal protein L1p/L10e family 
 ath-u.5   AT5G22440   Ribosomal protein L1p/L10e family 
 ath-u.5   AT1G08360   Ribosomal protein L1p/L10e family 
 bra-r.6   103851443   60S ribosomal protein L10a-3 
 bra-r.6   103845548   60S ribosomal protein L10a-3 
 bra-r.6   103871582   60S ribosomal protein L10a-1 
 bna-r.1   106396506   60S ribosomal protein L10a-2 
 bna-r.1   111214554   60S ribosomal protein L10a-3 
 bna-r.1   106436648   60S ribosomal protein L10a-3 
 cit-r.1   102609236   60S ribosomal protein L10a-3 
 gma-u.5   100527698   60S ribosomal protein L10a 
 gma-u.5   100305550   uncharacterized LOC100305550 
 gma-u.5   100499715   uncharacterized LOC100499715 
 vvi-u.5   100266487   large ribosomal subunit protein uL1z 
 vvi-u.5   100263858   large ribosomal subunit protein uL1 
 ppo-u.5   7473116   60S ribosomal protein L10a-2 
 ppo-u.5   7473122   60S ribosomal protein L10a-2 
 ppo-u.5   18098119   60S ribosomal protein L10a-2 
 mtr-u.5   11412225   60S ribosomal protein L10a-1 
 mtr-u.5   11428420   60S ribosomal protein L10a-1 
 mtr-u.5   11406763   60S ribosomal protein L10a-1 
 sly-u.5   101252594   large ribosomal subunit protein uL1z 
 sly-u.5   101258620   large ribosomal subunit protein uL1z 
 sly-u.5   101245686   large ribosomal subunit protein uL1z 
 sot-r.1   102587145   60S ribosomal protein L10a-1-like 
 sot-r.1   102606043   60S ribosomal protein L10a-1 
 sot-r.1   102599549   60S ribosomal protein L10a-1 
 nta-r.1   107830403   large ribosomal subunit protein uL1z 
 nta-r.1   107765506   large ribosomal subunit protein uL1z 
 nta-r.1   107769022   large ribosomal subunit protein uL1z-like 
 osa-u.5   4325065   large ribosomal subunit protein uL1-like 
 osa-u.5   4329171   large ribosomal subunit protein uL1-like 
 osa-u.5   9268245   large ribosomal subunit protein uL1-like 
 zma-u.5   100192963   ribosomal protein 
 zma-u.5   100272335   60S ribosomal protein L10a-1 
 zma-u.5   100502186   ribosomal protein 
 tae-r.2   123071494   60S ribosomal protein L10a 
 tae-r.2   123079832   60S ribosomal protein L10a 
 tae-r.2   123155974   60S ribosomal protein L10a 
 hvu-r.1   123407530   60S ribosomal protein L10a-like 
 hvu-r.1   123444833   60S ribosomal protein L10a-1 
 hvu-r.1   123446858   60S ribosomal protein L10a 
 sbi-r.1   8057983   60S ribosomal protein L10a 
 sbi-r.1   8057820   60S ribosomal protein L10a 
 bdi-r.1   100824924   60S ribosomal protein L10a 
 bdi-r.1   100828339   60S ribosomal protein L10a 
 bdi-r.1   100840807   60S ribosomal protein L10a-1 
 cre-r.1   CHLRE_02g101350v5   uncharacterized protein 

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Top 50 coexpressed genes to 107959356 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107959356 (ghi-r.1 coexpression data)

CoexMap"107959356"


ghiLOC107959356 | Entrez gene ID : 107959356    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 3 3 1 3 2 3 3 3 3 3 3 3 3 3 2 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03010 [list] [network] Ribosome (2429 genes)
GO BP
GO:0000470 [list] [network] maturation of LSU-rRNA  (98 genes)  IEA  
GO:0006412 [list] [network] translation  (1487 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (467 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (1075 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
Protein XP_016750885.1 [sequence] [blastp]
XP_040969077.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_016750885.1)
cyto 4,  nucl 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_040969077.1)
Subcellular
localization
TargetP
other 6  (predict for XP_016750885.1)
other 6  (predict for XP_040969077.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107959356
ghi-r.1
for
107959357
ghi-r.1
for
107891520
ghi-r.1
for
107941273
ath-u.5
for
PGY1
ath-u.5
for
AT5G22440
ath-u.5
for
AT1G08360
bra-r.6
for
103851443
bra-r.6
for
103845548
bra-r.6
for
103871582
bna-r.1
for
106396506
bna-r.1
for
111214554
bna-r.1
for
106436648
cit-r.1
for
102609236
gma-u.5
for
100527698
gma-u.5
for
100305550
gma-u.5
for
100499715
vvi-u.5
for
100266487
vvi-u.5
for
100263858
ppo-u.5
for
7473116
ppo-u.5
for
7473122
ppo-u.5
for
18098119
mtr-u.5
for
11412225
mtr-u.5
for
11428420
mtr-u.5
for
11406763
sly-u.5
for
101252594
sly-u.5
for
101258620
sly-u.5
for
101245686
sot-r.1
for
102587145
sot-r.1
for
102606043
sot-r.1
for
102599549
nta-r.1
for
107830403
nta-r.1
for
107765506
nta-r.1
for
107769022
osa-u.5
for
4325065
osa-u.5
for
4329171
osa-u.5
for
9268245
zma-u.5
for
100192963
zma-u.5
for
100272335
zma-u.5
for
100502186
tae-r.2
for
123071494
tae-r.2
for
123079832
tae-r.2
for
123155974
hvu-r.1
for
123407530
hvu-r.1
for
123444833
hvu-r.1
for
123446858
sbi-r.1
for
8057983
sbi-r.1
for
8057820
bdi-r.1
for
100824924
bdi-r.1
for
100828339
bdi-r.1
for
100840807
cre-r.1
for
CHLRE_02g101350v5


Ortholog ID: 1415
Species ghi ghi ghi ath ath ath bra bra bra bna bna bna cit gma gma gma vvi vvi ppo ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi bdi bdi bdi cre
Symbol LOC107959356 LOC107959357 LOC107889172 PGY1 AT5G22440 AT1G08360 LOC103871582 LOC103829674 LOC103856517 LOC106436648 LOC106384670 LOC106424329 LOC102609236 LOC100527698 LOC100499715 LOC100808580 LOC100266487 LOC100263858 LOC7473116 LOC18098119 LOC18098120 LOC11412225 LOC11428420 LOC11406763 LOC101252594 LOC101258620 LOC101245686 LOC102587145 LOC102606043 LOC102599549 LOC107765506 LOC107771734 LOC107784026 LOC4325065 LOC9268245 LOC9266191 LOC100192963 LOC100272335 LOC100502186 LOC123071494 LOC123155974 LOC123090526 LOC123407530 LOC123444833 LOC123446858 LOC8057983 LOC110433989 LOC100824924 LOC100828339 LOC100840807 CHLRE_02g101350v5
Function* 60S ribosomal protein L10a 60S ribosomal protein L10a 60S ribosomal protein L10a-1 Ribosomal protein L1p/L10e family Ribosomal protein L1p/L10e family Ribosomal protein L1p/L10e family 60S ribosomal protein L10a-1 60S ribosomal protein L10a-2 60S ribosomal protein L10a-3 60S ribosomal protein L10a-3 60S ribosomal protein L10a-3-like 60S ribosomal protein L10a-2 60S ribosomal protein L10a-3 60S ribosomal protein L10a uncharacterized LOC100499715 60S ribosomal protein L10a large ribosomal subunit protein uL1z large ribosomal subunit protein uL1 60S ribosomal protein L10a-2 60S ribosomal protein L10a-2 60S ribosomal protein L10a-2 60S ribosomal protein L10a-1 60S ribosomal protein L10a-1 60S ribosomal protein L10a-1 large ribosomal subunit protein uL1z large ribosomal subunit protein uL1z large ribosomal subunit protein uL1z 60S ribosomal protein L10a-1-like 60S ribosomal protein L10a-1 60S ribosomal protein L10a-1 large ribosomal subunit protein uL1z large ribosomal subunit protein uL1z large ribosomal subunit protein uL1z-like large ribosomal subunit protein uL1-like large ribosomal subunit protein uL1-like 60S ribosomal protein L10a ribosomal protein 60S ribosomal protein L10a-1 ribosomal protein 60S ribosomal protein L10a 60S ribosomal protein L10a 60S ribosomal protein L10a 60S ribosomal protein L10a-like 60S ribosomal protein L10a-1 60S ribosomal protein L10a 60S ribosomal protein L10a 60S ribosomal protein L10a-like 60S ribosomal protein L10a 60S ribosomal protein L10a 60S ribosomal protein L10a-1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 12
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 9
ghi03040 Spliceosome 2
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 16
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 17
ppo00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 13
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 18
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 16
hvu00240 Pyrimidine metabolism 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 19
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 18
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107959356 107959357 107889172 817299 832305 837356 103871582 103829674 103856517 106436648 106384670 106424329 102609236 100527698 100499715 100808580 100266487 100263858 7473116 18098119 18098120 11412225 11428420 11406763 101252594 101258620 101245686 102587145 102606043 102599549 107765506 107771734 107784026 4325065 9268245 9266191 100192963 100272335 100502186 123071494 123155974 123090526 123407530 123444833 123446858 8057983 110433989 100824924 100828339 100840807 5725358
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