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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107959793   RNA-binding protein 7 
 ghi-r.1   121216283   RNA-binding protein 7 
 ath-u.5   AT4G10110   RNA-binding (RRM/RBD/RNP motifs) family protein 
 bra-r.6   103838899   RNA-binding protein 7 
 bna-r.1   106439150   splicing factor 3B subunit 4 
 bna-r.1   106359693   spliceosome-associated protein 49 
 cit-r.1   102612062   uncharacterized LOC102612062 
 gma-u.5   100803118   splicing factor 3B subunit 4 
 gma-u.5   100784532   splicing factor 3B subunit 4-like 
 vvi-u.5   100244774   uncharacterized LOC100244774 
 vvi-u.5   100252755   hypothetical protein 
 ppo-u.5   18108414   uncharacterized LOC18108414 
 mtr-u.5   11408527   RNA-binding protein 7 
 sly-u.5   101258326   uncharacterized LOC101258326 
 sot-r.1   102602409   splicing factor 3B subunit 4 
 nta-r.1   107816527   uncharacterized LOC107816527 
 nta-r.1   107806640   uncharacterized LOC107806640 
 nta-r.1   107777009   organelle RRM domain-containing protein 6, chloroplastic-like 
 osa-u.5   107277261   uncharacterized LOC107277261 
 osa-u.5   4338860   uncharacterized LOC4338860 
 zma-u.5   103650933   splicing factor 3B subunit 4 
 zma-u.5   100384862   RNA recognition motif-containing protein 
 zma-u.5   100193321   uncharacterized LOC100193321 
 tae-r.2   123056871   RNA-binding protein 7 
 tae-r.2   123071612   splicing regulator RBM11 
 tae-r.2   123079955   splicing regulator RBM11 
 hvu-r.1   123443116   spliceosome-associated protein 49 
 hvu-r.1   123444750   splicing regulator RBM11-like 
 sbi-r.1   110430206   splicing factor 3B subunit 4-like 
 bdi-r.1   100841208   spliceosome-associated protein 49 
 bdi-r.1   104582652   splicing regulator RBM11 

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Top 50 coexpressed genes to 107959793 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107959793 (ghi-r.1 coexpression data)

CoexMap"107959793"


ghiLOC107959793 | Entrez gene ID : 107959793    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 2 2 1 1 1 1 3 2 3 3 2 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03040 [list] [network] Spliceosome (739 genes)
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
Protein XP_016751434.1 [sequence] [blastp]
XP_040970280.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_016751434.1)
nucl 9  (predict for XP_040970280.1)
Subcellular
localization
TargetP
other 7  (predict for XP_016751434.1)
other 7  (predict for XP_040970280.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107959793
ghi-r.1
for
121216283
ath-u.5
for
AT4G10110
bra-r.6
for
103838899
bna-r.1
for
106439150
bna-r.1
for
106359693
cit-r.1
for
102612062
gma-u.5
for
100803118
gma-u.5
for
100784532
vvi-u.5
for
100244774
vvi-u.5
for
100252755
ppo-u.5
for
18108414
mtr-u.5
for
11408527
sly-u.5
for
101258326
sot-r.1
for
102602409
nta-r.1
for
107816527
nta-r.1
for
107806640
nta-r.1
for
107777009
osa-u.5
for
107277261
osa-u.5
for
4338860
zma-u.5
for
103650933
zma-u.5
for
100384862
zma-u.5
for
100193321
tae-r.2
for
123056871
tae-r.2
for
123071612
tae-r.2
for
123079955
hvu-r.1
for
123443116
hvu-r.1
for
123444750
sbi-r.1
for
110430206
bdi-r.1
for
100841208
bdi-r.1
for
104582652


Ortholog ID: 6296
Species ghi ghi ath bra bna bna cit gma gma vvi vvi ppo mtr sly sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu sbi bdi bdi
Symbol LOC107959793 LOC121216283 AT4G10110 LOC103838899 LOC106439150 LOC106359693 LOC102612062 LOC100803118 LOC100784532 LOC100244774 LOC100252755 LOC18108414 LOC11408527 LOC101258326 LOC102602409 LOC107816527 LOC107806640 LOC107777009 LOC107277261 LOC4338860 LOC103650933 LOC100384862 LOC100193321 LOC123079955 LOC123134273 LOC123182104 LOC123443116 LOC123444750 LOC110430206 LOC100841208 LOC104582652
Function* RNA-binding protein 7 RNA-binding protein 7 RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding protein 7 splicing factor 3B subunit 4 spliceosome-associated protein 49 uncharacterized LOC102612062 splicing factor 3B subunit 4 splicing factor 3B subunit 4-like uncharacterized LOC100244774 hypothetical protein uncharacterized LOC18108414 RNA-binding protein 7 uncharacterized LOC101258326 splicing factor 3B subunit 4 uncharacterized LOC107816527 uncharacterized LOC107806640 organelle RRM domain-containing protein 6, chloroplastic-like uncharacterized LOC107277261 uncharacterized LOC4338860 splicing factor 3B subunit 4 RNA recognition motif-containing protein uncharacterized LOC100193321 splicing regulator RBM11 RNA-binding protein 7 RNA-binding protein 7 spliceosome-associated protein 49 splicing regulator RBM11-like splicing factor 3B subunit 4-like spliceosome-associated protein 49 splicing regulator RBM11
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 4
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 4
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00510 N-Glycan biosynthesis 3
bna00513 Various types of N-glycan biosynthesis 3
bna04141 Protein processing in endoplasmic reticulum 3
bna00270 Cysteine and methionine metabolism 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00510 N-Glycan biosynthesis 5
bna00513 Various types of N-glycan biosynthesis 5
bna04141 Protein processing in endoplasmic reticulum 5
bna03040 Spliceosome 2
bna00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 2
cit04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00564 Glycerophospholipid metabolism 3
sot00440 Phosphonate and phosphinate metabolism 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 4
nta03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03015 mRNA surveillance pathway 2
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 4
nta00450 Selenocompound metabolism 2
nta04146 Peroxisome 2
nta03040 Spliceosome 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 3
zma04070 Phosphatidylinositol signaling system 3
zma04075 Plant hormone signal transduction 3
zma04626 Plant-pathogen interaction 3
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 6
zma03040 Spliceosome 3
zma04141 Protein processing in endoplasmic reticulum 2
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
zma04120 Ubiquitin mediated proteolysis 3
zma04141 Protein processing in endoplasmic reticulum 2
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
hvu04141 Protein processing in endoplasmic reticulum 2
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 8
bdi04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 3
bdi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107959793 121216283 826602 103838899 106439150 106359693 102612062 100803118 100784532 100244774 100252755 18108414 11408527 101258326 102602409 107816527 107806640 107777009 107277261 4338860 103650933 100384862 100193321 123079955 123134273 123182104 123443116 123444750 110430206 100841208 104582652
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