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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   110432370   flowering time control protein FCA 
 zma-u.5   100383162   RNA binding 
 osa-u.5   4346429   flowering time control protein FCA 
 tae-r.2   123111501   flowering time control protein FCA 
 tae-r.2   123120723   flowering time control protein FCA 
 tae-r.2   543096   flowering time control protein FCA 
 hvu-r.1   123399188   flowering time control protein FCA-like 
 bdi-r.1   100836687   flowering time control protein FCA 
 ath-u.5   FCA   flowering time control protein FCA 
 gma-u.5   100798390   flowering time control protein FCA 
 gma-u.5   100786792   flowering time control protein FCA 
 sly-u.5   101267262   flowering time control protein FCA 
 bra-r.6   FCA   flowering time control protein FCA 
 vvi-u.5   FCA   flowering time control 
 ppo-u.5   18102616   flowering time control protein FCA 
 mtr-u.5   11418334   flowering time control protein FCA 
 ghi-r.1   107916225   flowering time control protein FCA 
 ghi-r.1   107896590   flowering time control protein FCA 
 bna-r.1   106367467   flowering time control protein FCA 
 bna-r.1   125575626   flowering time control protein FCA-like 
 sot-r.1   102581555   flowering time control protein FCA 
 cit-r.1   102613412   flowering time control protein FCA 
 nta-r.1   107794627   flowering time control protein FCA 
 nta-r.1   107792724   flowering time control protein FCA 

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Top 50 coexpressed genes to 110432370 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 110432370 (sbi-r.1 coexpression data)

CoexMap"110432370"


sbiLOC110432370 | Entrez gene ID : 110432370    
Species sbi zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 1 1 3 1 1 1 2 1 1 1 1 1 2 2 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:1990904 [list] [network] ribonucleoprotein complex  (562 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2977 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4816 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (267 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_021308303.1 [sequence] [blastp]
XP_021308304.1 [sequence] [blastp]
XP_021308305.1 [sequence] [blastp]
XP_021308306.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_021308303.1)
nucl 10  (predict for XP_021308304.1)
nucl 10  (predict for XP_021308305.1)
nucl 10  (predict for XP_021308306.1)
Subcellular
localization
TargetP
chlo 4,  mito 3,  other 3  (predict for XP_021308303.1)
chlo 4,  mito 3,  other 3  (predict for XP_021308304.1)
chlo 4,  mito 3,  other 3  (predict for XP_021308305.1)
chlo 4,  mito 3,  other 3  (predict for XP_021308306.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
110432370
zma-u.5
for
100383162
osa-u.5
for
4346429
tae-r.2
for
123111501
tae-r.2
for
123120723
tae-r.2
for
543096
hvu-r.1
for
123399188
bdi-r.1
for
100836687
ath-u.5
for
FCA
gma-u.5
for
100798390
gma-u.5
for
100786792
sly-u.5
for
101267262
bra-r.6
for
FCA
vvi-u.5
for
FCA
ppo-u.5
for
18102616
mtr-u.5
for
11418334
ghi-r.1
for
107916225
ghi-r.1
for
107896590
bna-r.1
for
106367467
bna-r.1
for
125575626
sot-r.1
for
102581555
cit-r.1
for
102613412
nta-r.1
for
107794627
nta-r.1
for
107792724


Ortholog ID: 10857
Species sbi zma osa tae tae tae hvu bdi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta
Symbol LOC110432370 LOC100383162 LOC4346429 LOC123111501 LOC123120723 LOC543096 LOC123399188 LOC100836687 FCA LOC100798390 LOC100786792 LOC101267262 FCA FCA LOC18102616 LOC11418334 LOC107916225 LOC107896590 LOC106367467 LOC125575626 LOC102581555 LOC102613412 LOC107794627 LOC107792724
Function* flowering time control protein FCA RNA binding flowering time control protein FCA flowering time control protein FCA flowering time control protein FCA flowering time control protein FCA flowering time control protein FCA-like flowering time control protein FCA flowering time control protein FCA flowering time control protein FCA flowering time control protein FCA flowering time control protein FCA flowering time control protein FCA flowering time control flowering time control protein FCA flowering time control protein FCA flowering time control protein FCA flowering time control protein FCA flowering time control protein FCA flowering time control protein FCA-like flowering time control protein FCA flowering time control protein FCA flowering time control protein FCA flowering time control protein FCA
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 5
tae00860 Porphyrin metabolism 3
tae00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 5
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 4
ppo03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 6
ghi03013 Nucleocytoplasmic transport 4
ghi03040 Spliceosome 4
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 4
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 4
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
sot03013 Nucleocytoplasmic transport 2
sot03015 mRNA surveillance pathway 2
sot03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03022 Basal transcription factors 2
cit03420 Nucleotide excision repair 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03015 mRNA surveillance pathway 5
nta03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 110432370 100383162 4346429 123111501 123120723 543096 123399188 100836687 827323 100798390 100786792 101267262 103869778 100255122 18102616 11418334 107916225 107896590 106367467 125575626 102581555 102613412 107794627 107792724
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